Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2941 |
Symbol | |
ID | 4039769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3195691 |
End bp | 3196647 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637978341 |
Product | LysR family transcriptional regulator |
Protein accession | YP_585083 |
Protein GI | 94311873 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0694604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCA CCGAACTCAA GTACATCGTC GCCGTGGCGC GCGAGCGCCA TTTCGGCCGG GCTGCCGAGG CCTGCTTCGT GTCGCAGCCG ACCCTGTCGG TCGCCATCAA GAAGCTGGAG GACGAGCTGA CCGTGCAGAT CTTCGAGCGG GGCACCTCCG AGGTGTCGGT GACGGCCATC GGCGAGCAGA TCGTCGCGCA GGCGCAGCGT GTGCTTGAGC AGACCATGGC GATTCGTGAG ATCGCCAAGC AGGGCAAGGA CCCGCTGGCC GGGCCGCTGC GATTGGGCGT GATCTACACG ATCGGGCCGT ACCTGCTGCC GGCACTGGTC AAGCAGATGA TCGAGACCGT GCCGCAGATG CCGCTGATGC TGCAGGAGAA CTACACGAAC AAGCTGATCG AACTGCTCAA GCAGGGCGAA ATCGACTGCG CGATCATGGC CGAGCCGTTC CCGGACTCCG GCCTGACGGT GCGTCCGCTG TATGACGAGC CGTTCGTGGT GGCCGTGCCG CGCGGGCACC AGCTTTCCCA GCAGACCAAG GTGGATCCGG ACGAACTGAA GCAGCAGACC ATGCTGCTGC TCGGCAGCGG CCATTGTTTC CGCGATCACG TGCTGAGCGT GTGTCCGGAA CTGTCGCGCT TCTCGCAGGC GGCCGACGGC ATCCAGAAGA CGTTCGAAGG TTCGTCGCTC GAGACCATCC GTCATATGGT GGCCAGCGGT GTTGGTATCA CCGTGCTGCC GCGCACCTCG GTGCCCGACC TCAAGCCGCA CAACGACATG CTGTCCTACG TGCCGTTTGC CGAGCCCGTG CCGGACCGCC GCGTGGTGCT GGCCTGGCGC AAGAGCTTCA CGCGGCTTCC CGCCATGGAA GCGCTGGCCA ACGCGGTGGC CGCGTGCGAA CTGCCCGGCG TGCGCAGGCT CGGCGACACG GAGACGGTCG AGGCCGTCGC GGCCTGA
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Protein sequence | MTLTELKYIV AVARERHFGR AAEACFVSQP TLSVAIKKLE DELTVQIFER GTSEVSVTAI GEQIVAQAQR VLEQTMAIRE IAKQGKDPLA GPLRLGVIYT IGPYLLPALV KQMIETVPQM PLMLQENYTN KLIELLKQGE IDCAIMAEPF PDSGLTVRPL YDEPFVVAVP RGHQLSQQTK VDPDELKQQT MLLLGSGHCF RDHVLSVCPE LSRFSQAADG IQKTFEGSSL ETIRHMVASG VGITVLPRTS VPDLKPHNDM LSYVPFAEPV PDRRVVLAWR KSFTRLPAME ALANAVAACE LPGVRRLGDT ETVEAVAA
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