| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2934 |
|---|
| Symbol | |
|---|
| ID | 4039762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3189323 |
|---|
| End bp | 3189817 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637978334 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_585076 |
|---|
| Protein GI | 94311866 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0465616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG TGTACCAGTT CGAAGCCAAT TCGCTGTCCG GCCAGCCTCA GCCGCTGGCC
GACTACCGCG GCAAGGTGCT GCTGATCGTC AACACCGCGA GCGAATGTGG CTTCACGCCG
CAATACGCGG GCCTGCAGAC GCTGCAGGCG TCCTATCAGG CGCGCGGCTT CGACGTGCTT
GGCTTTCCCT GCAACCAGTT TGGCAAGCAG GAGCCTGGTG ACGCCGAACA AATTGGCGCG
TTTTGCGAAT CCCGATTTCA CGTCACGTTC CCGATGTTCG AGAAAATCGA CGTGAACGGC
GCGGACGCGC ATCCGCTCTA CAAGTGGCTG ACGTCGGAGA AGCGGGGGTT CCTCGGTACC
CAGGCGATCA AGTGGAATTT CACCAAGTTC CTGCTGCGCC GCGACGGTAC CGTCTTCAAG
CGTTATGCGT CCACAACCAA GCCCGAGGAA ATCCGCGCAG ACATCGAGTC GCTGCTCGCC
GAACAACCGG CGTGA
|
|---|
| Protein sequence | MSNVYQFEAN SLSGQPQPLA DYRGKVLLIV NTASECGFTP QYAGLQTLQA SYQARGFDVL
GFPCNQFGKQ EPGDAEQIGA FCESRFHVTF PMFEKIDVNG ADAHPLYKWL TSEKRGFLGT
QAIKWNFTKF LLRRDGTVFK RYASTTKPEE IRADIESLLA EQPA
|
|---|
| |