| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2921 |
|---|
| Symbol | |
|---|
| ID | 4039749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3175267 |
|---|
| End bp | 3176406 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637978321 |
|---|
| Product | chaperone protein DnaJ |
|---|
| Protein accession | YP_585063 |
|---|
| Protein GI | 94311853 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0121301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC GTGACTACTA CGAAGTGCTC GGGGTAGGCA AGAACGCGAG CGACGACGAG
ATCAAGAAGG CTTATCGCAA GCTCGCGATG AAGCACCATC CGGACCGCAA TCCGGATAAC
AAGGAAGCCG AGGAGAAATT CAAGGAGGTC AAGGAGGCCT ACGAGATGCT CTCCGACCCC
GAGAAGAAGG CGGCTTACGA TCAATACGGC CACGCTGGCG TGGACCCGAA CATGGCCGGT
GGATTCGGCG GCGGCGGGTT TGGCGGCGGT GGCTTCGCGG AAGCGTTCGG CGATATCTTC
GGCGACATCT TCGGCCAGGC AGCCGGCGGC GGACGTCGTG GCGGCGGCCC GCAGGCCTAC
CGTGGCGCCG ACCTGCGCTA CAGCATGGAG ATCTCGCTGG AGCAGGCCGC GCATGGCCAC
GAGGCGCAGA TCCGCGTGCC GCACTGGGAC GATTGCGAAC ACTGCCACGG CAATGGCGCC
GAGCCGGGTT CGTCGGTCGA AACCTGCCCG ACCTGTAATG GCGTGGGCCA GGTGCGTGTG
TCGCAGGGCT TCTTCACGAT GCAGCAGACC TGCCCGAAGT GCCACGGCAG CGGCAAGTTC
ATCCCGAAGC CGTGCACCAA GTGCCACGGT CAGGGCAAGC TCAAGTCGCA GAAGACGCTC
GAGGTCAAGA TTCCGGCCGG TATCGATGAA GGGATGCGTA TCCGTTCGTC GGGCAACGGC
GAGCCGGGCA TCAACGGTGG CCCGCCGGGC GATCTCTACG TCGAGGTGCA TATCAAGCAG
CACCCGGTGT TCGAGCGCGA CGGCGACGAC CTGCACTGCC AGATGCCGAT CTCGTTCGCT
ACGGCGGCGC TGGGCGGCGA TATCGAAGTG CCGACGCTGG GCGGCCGGGC CAGTTTCCCG
GTGCCGGAAG GCACCCAGGC CGGCAAGACG TTCCGCCTGC GCGGCAAGGG CATCAAGGGT
GTGCGCTCGG GATATCCGGG CGACCTCTAT GTGCATGTGA ACGTGGAGAC GCCGGTCAAG
CTGACCGAGG CCCAGAAGGA CATACTGCGT CAGTTCGACC GCTCGGTGCA CGAGGGCGGT
TCGCGTCACA GCCCGCAGGA GCAGTCCTGG CTCGACAAGG TGAAGAGCTT CTTTAGCTGA
|
|---|
| Protein sequence | MAKRDYYEVL GVGKNASDDE IKKAYRKLAM KHHPDRNPDN KEAEEKFKEV KEAYEMLSDP
EKKAAYDQYG HAGVDPNMAG GFGGGGFGGG GFAEAFGDIF GDIFGQAAGG GRRGGGPQAY
RGADLRYSME ISLEQAAHGH EAQIRVPHWD DCEHCHGNGA EPGSSVETCP TCNGVGQVRV
SQGFFTMQQT CPKCHGSGKF IPKPCTKCHG QGKLKSQKTL EVKIPAGIDE GMRIRSSGNG
EPGINGGPPG DLYVEVHIKQ HPVFERDGDD LHCQMPISFA TAALGGDIEV PTLGGRASFP
VPEGTQAGKT FRLRGKGIKG VRSGYPGDLY VHVNVETPVK LTEAQKDILR QFDRSVHEGG
SRHSPQEQSW LDKVKSFFS
|
|---|
| |