| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2917 |
|---|
| Symbol | panB |
|---|
| ID | 4039745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 3171044 |
|---|
| End bp | 3171865 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637978317 |
|---|
| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| Protein accession | YP_585059 |
|---|
| Protein GI | 94311849 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
|---|
| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTACC TCCTCGATCC CTCCCGCAAG ACCGTCACCA TCCCCAAACT GCAGGCCATG
CGTGAAGCCG GCGAAAAGAT CGCCATGCTC ACCGCCTACG ATTCCAGCTT CTCCGCGCTG
CTCGATCTCT GCGGCGTGGA AGTGATCCTG GTCGGCGATT CGCTCGGCAA CGTGATGCAG
GGCCAGCAGA CCACGCTGCC CGTCACGCTC GAGCACATGG TCTATCACAC CGAATGCGTG
TCGCGCGGCA ACCAGACCGC GCTGCTCGTA TCCGACCTGC CGTTCGGCAC GTATCCCACC
CCCGAGAAGG CCTTCGAAAG CGCCGCCGCG CTGATGCGTG CTGGCGCGCA GATGGTCAAG
CTCGAAGGCG GAGACTGGCT GGCGCCGACG GTGAAGTTCC TGGTCGAGCG CAGCATTCCG
GTATGCGCGC ATATCGGGCT GACACCGCAA TCGGTACACG CGCTCGGCGG CTTCAAGGTG
CAGGGCAAGA CCGACGAGAG CGCCGCGCAG CTGAAGCGTG ACGCGCTGGC GCTGCAGCAA
GCCGGCGCGC AGCTGATCGT CATGGAGGCC GTGCCGGCCA AGCTCGCCGC CGAAGTGACG
GCGCAACTCT CCATCCCGAC CATCGGTATC GGCGCTGGTG TCGATTGCTC GGGCCAGGTG
CTGGTGCTGC AGGACATGAT CAACATCTAC CCGGGCCGCA AGGCCAAGTT CGTACGCAAC
TTCATGGAGG GACAGCCCTC GATCGAAGCG GCGATCCGCG CCTATGTGGC TGCTGTGAAG
GACGGCAGCT TCCCGGCCGT CGAGCACACG TTCTCGGCCT GA
|
|---|
| Protein sequence | MSYLLDPSRK TVTIPKLQAM REAGEKIAML TAYDSSFSAL LDLCGVEVIL VGDSLGNVMQ
GQQTTLPVTL EHMVYHTECV SRGNQTALLV SDLPFGTYPT PEKAFESAAA LMRAGAQMVK
LEGGDWLAPT VKFLVERSIP VCAHIGLTPQ SVHALGGFKV QGKTDESAAQ LKRDALALQQ
AGAQLIVMEA VPAKLAAEVT AQLSIPTIGI GAGVDCSGQV LVLQDMINIY PGRKAKFVRN
FMEGQPSIEA AIRAYVAAVK DGSFPAVEHT FSA
|
|---|
| |