Gene Rmet_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2908 
SymbolmutL 
ID4039736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3161819 
End bp3163786 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content67% 
IMG OID637978308 
ProductDNA mismatch repair protein 
Protein accessionYP_585050 
Protein GI94311840 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCG AAGCCGACCG TACCCATCCT CGCACCGCCC AACCCAACCG CCCCATTCGC 
CCGCTGCCGG ACCAGCTGAT CAGCCAGATC GCCGCCGGTG AAGTGGTGGA ACGGCCCGCG
TCGGTCGTCA AGGAACTGCT CGAGAACGCA CTCGACGCCG GCGCCACGCA ACTGGGTATC
CGGCTCGAGG AAGGCGGCGT GAGACGCATC GTCATCACCG ACAACGGCTG CGGCATCCCC
GCCGACGAAC TACCCGTCGC GCTGATGCGC CACGCCACCA GCAAGATCGC CTCGCTGGAC
GAACTCGAAT CGGTCCTGAC ACTGGGCTTC CGCGGCGAGG CGCTGGCCTC GATTGCCTCG
GTCTCCCATC TCGTGCTGAC CAGCCGCACG GCCACCGCCA CGCACGCCAC CCAGATCAGC
GCGGACACCG GCCATCTGCA ACCCGCTTCA GGCGGAGTTG GCACGATGAT CGACGTGCAG
CACCTGTACT TCAACACGCC AGCCCGTAGA AAGTTCCTGA AATCGGAACA AACCGAGCTG
GGGCATTGCC TGGAGATGAT CCGCCGCGCC GCGCTGGCAC GGCCCGACGT CACGATTTCG
GTGCATCACA ACGGCAAGCC GCTGGAGCAC TGGAATGCCG GCGACGTGGC CACGCGCACG
GCGCAGGTGC TCGGCAGCGA CTTCGCACGC GCCCGCCTGC CGCTCGACGA ACAGGCCGAC
GCGCTGCACC TCTATGGCTT TGCCGGGCTA CCCACTGCAT CGCGAGGCCG GCCTGACCAG
CAGTATTTCT TCGTCAATGG CCGTTTCGTG CGCGACAAGC TGCTCAACCA TGCCGTGCGC
AGCGCCTATC AGGACGTGCT GCATGGGGAC CGATTCCCAT CGTATGTGAT CTGCCTGGAC
CTGCCGCCCG AACTGGTCGA CGTGAACGTT CACCCGTCCA AGATCGAGGT TCGCTTCCGC
GAATCGCGTG CGGTGCACCA GTTCGTCTAT CACGCAGTGC AGCGATGCCT TGCACGCCAG
GCCGGCGAGC AAGGCGACAG CCTGCATTCG GAGATCGCCG ATGAGGCAGG ACGGCCTTCG
ATGCCTGCGG CCCGCCCAGT CGGCGCGCCG GGTGCGCCGG GAGCCGCGCC GCAGTGGGTC
AATTATTCGG CAGGCCGCCA GACCGAGCTT GGTATCGCAC AGCCGCGCCA AGCCTATCTG
GGCATGGTCC GCGACGCCGC CGGGCAAGGT AGCGCGCGGC CCTGGCAACC GTCGCCGCAG
CCGCCCGCAT GGCTGGCCGA CGCACAGGCG GCACGCGCAG ACGAACCGCC GGGCCTGCTC
GACCGATTAC CGCAGCAACC GCTGCAGCCT TCCACCCTGC CCGCGGCAGG CGAAGGCGAC
GATGATCATC CGCTCGGTTA CGCAGTGGCG CAGTTGCACG GCATCTATGT GCTAGCGCAG
AACGCCCGGG GGCTGGTGCT GGTCGATATG CACGCGGCGC ACGAGCGCAT CCTGTACGAA
CAGATCAAGA CCGCCCTTGA GGCGCGCGAA CTGGCGGTGC AGCCGCTACT GATTCCGGTC
ACGCTGCCGG CCAGTCCGGT GGAAATCGGC GCGGCCGAAG AACACCAGGA AACGCTGCAA
CTGCTCGGCT TCGACATCAA GCCCGTATCC CCCACGACGC TCGCCGTGCG CGCGATTCCC
GCGCTGCTCA AGCAGGCCGA TACCGAAGCC TTGGCACGCG ACGTGCTGCG CGACCTGCAG
GCCTACGGAG GCTCGCGCGT GCTGGCCGAG CGCCAGAATG AATTGCTGGC CACGTTGGCT
TGCCACAGCG CCGTGCGCGC CAATCGCAAG CTGACCGTAG AAGAGATGAA CGCCTTGCTG
CGCCAGATGG AGCAGACCGA GCGCGCCGAC CAGTGCAACC ACGGCCGCCC GACATGGGTG
CAGTTGACGG TTGCGGAACT CGACCGCCTG TTCCTGCGCG GCCAGTAA
 
Protein sequence
MPAEADRTHP RTAQPNRPIR PLPDQLISQI AAGEVVERPA SVVKELLENA LDAGATQLGI 
RLEEGGVRRI VITDNGCGIP ADELPVALMR HATSKIASLD ELESVLTLGF RGEALASIAS
VSHLVLTSRT ATATHATQIS ADTGHLQPAS GGVGTMIDVQ HLYFNTPARR KFLKSEQTEL
GHCLEMIRRA ALARPDVTIS VHHNGKPLEH WNAGDVATRT AQVLGSDFAR ARLPLDEQAD
ALHLYGFAGL PTASRGRPDQ QYFFVNGRFV RDKLLNHAVR SAYQDVLHGD RFPSYVICLD
LPPELVDVNV HPSKIEVRFR ESRAVHQFVY HAVQRCLARQ AGEQGDSLHS EIADEAGRPS
MPAARPVGAP GAPGAAPQWV NYSAGRQTEL GIAQPRQAYL GMVRDAAGQG SARPWQPSPQ
PPAWLADAQA ARADEPPGLL DRLPQQPLQP STLPAAGEGD DDHPLGYAVA QLHGIYVLAQ
NARGLVLVDM HAAHERILYE QIKTALEARE LAVQPLLIPV TLPASPVEIG AAEEHQETLQ
LLGFDIKPVS PTTLAVRAIP ALLKQADTEA LARDVLRDLQ AYGGSRVLAE RQNELLATLA
CHSAVRANRK LTVEEMNALL RQMEQTERAD QCNHGRPTWV QLTVAELDRL FLRGQ