| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2895 |
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| Symbol | |
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| ID | 4039723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3150904 |
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| End bp | 3152154 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637978295 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_585037 |
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| Protein GI | 94311827 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.328131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCAGC ACATCAAGGT GCCGGCAGGC GAGAAGATCA AGGTCAACGC CGATCTTTCG
CTGAACGTGC CGGATAATCC GATCATTCCC TACATCGAAG GTGACGGCAC GGGTGTCGAT
ATCACCCCGG TGATGCTGAA AGTGGTGGAT GCCGCCGTGG CCAAGGCGTA TGGCGGCAAG
CGCAAGATCT CGTGGATGGA GATCTACGCG GGCGAGAAGT CGACCAAGGT CTATGGCCCG
GATGTGTGGC TGCCGGAAGA GACCATGGAA GTGGTCAAGG AATACGTGGT GTCGATCAAG
GGCCCGCTGA CCACGCCGGT CGGTGGTGGC ATCCGCTCGC TGAACGTGGC ACTGCGTCAG
CAGCTCGATC TCTATGTCTG CTTGCGCCCG GTGCGTTATT TCAAAGGCGT GCCGTCCCCG
GTGCGCGAGC CCGAGAAGAC CGACATGGTG ATCTTCCGCG AGAACTCGGA AGACATCTAT
GCCGGCATCG AGTGGGAAGC CGAAAGCGAA GGCGCGAAGA AGCTGATCGC CTTCCTGCAG
AACGAAATGG GCGTGAAGAA GATCCGCTTC CCGGAAACGT CCGGCATCGG CATCAAGCCC
GTCTCGAAGG AAGGCACGCA GCGCCTGGTG CGCAAGGCGC TCCAGTACGC GATCGACAAC
GACAAGCCGT CGGTGACGCT CGTGCACAAG GGCAACATCA TGAAGTTCAC CGAAGGCGGC
TTCCGCGACT GGGGCTATGA ACTCGCGCAG CAGGAATTTG GCGCGGAACT GGTCGATGGC
GGCCCGTGGT GCAAGTTCAA GAATCCGAAG ACTGGCCGCG ATATCGTCGT CAAGGACGCT
ATCGCCGACG CATTCCTGCA GCAGATTCTG CTGCGTCCAG CTGAATATTC GGTGATCGCC
ACGCTGAACC TGAACGGTGA CTACATCTCC GACGCCCTGG CCGCCCAGGT GGGTGGCATC
GGCATCGCAC CGGGCGCGAA CATGTCCGAT TCGGTCGCCA TGTTCGAAGC CACGCACGGC
ACCGCGCCGA AGTATGCAGG CAAGGACTAC GTGAATCCAG GTTCGGAAAT CCTCTCCGCG
GAAATGATGC TGCGCCACAT GGGCTGGACC GAAGCGGCCG ACCTGATCAT CCGCTCGATG
GAGAAGTCGA TCCAGTCGAA GAAGGTCACG TACGACTTCG CCCGGCTGCT AGAAGGTGCG
ACGCAGGTGT CGTGCTCGGG GTTTGGTCAG GTGATGATCG ACAATATGTA A
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| Protein sequence | MYQHIKVPAG EKIKVNADLS LNVPDNPIIP YIEGDGTGVD ITPVMLKVVD AAVAKAYGGK
RKISWMEIYA GEKSTKVYGP DVWLPEETME VVKEYVVSIK GPLTTPVGGG IRSLNVALRQ
QLDLYVCLRP VRYFKGVPSP VREPEKTDMV IFRENSEDIY AGIEWEAESE GAKKLIAFLQ
NEMGVKKIRF PETSGIGIKP VSKEGTQRLV RKALQYAIDN DKPSVTLVHK GNIMKFTEGG
FRDWGYELAQ QEFGAELVDG GPWCKFKNPK TGRDIVVKDA IADAFLQQIL LRPAEYSVIA
TLNLNGDYIS DALAAQVGGI GIAPGANMSD SVAMFEATHG TAPKYAGKDY VNPGSEILSA
EMMLRHMGWT EAADLIIRSM EKSIQSKKVT YDFARLLEGA TQVSCSGFGQ VMIDNM
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