| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2883 |
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| Symbol | |
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| ID | 4039711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3135681 |
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| End bp | 3137381 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637978283 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_585025 |
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| Protein GI | 94311815 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.127165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCAT TGATCCGTGA GGATGAATCT GCGCCCTCCG GCATCCCGCA GCGATGGGGC
GACATCAATT GGCGCCGCGT CGAACGGAAT GTTCGGGCAA TGCAGATTCG AATTGCGAAG
GCAACACAGG AAGGGGATTG GCGCAGGGTG AAAACCTTGC AACGGTCCCT GACCCGCTCG
TTTTCTGCCA AGGCATCGGC GGTAAGGCGA GTGGCGATGA ACCAAGGAGC GCGGACGGCT
GGTGTCGACC GCGTTGCGTG GGACTCGCCT GAAGCTCGAT GGGAATCCAT TGGGAGGTTG
AAGCGCCGGG GGTATCGTCC GCTGCCGTTA AGGCGGGTGT ACATCCCCAA GGCGAATGGG
AAGGAACGCC CCTTGGGCAT TCCAACTCTG CACGACCGAG CCATGCAGGC GCTATACCTG
CTGGCGCTGG AGCCGGTGTC CGAGGGGACG AGCGATCCGA ACTCTTACGG GTTTCGGATT
AATCGTTCGA CTGCGGATGC CATGTCCCAG CTGTTTGTCT CCTTGTCCAA AAAGGCTTCG
GCCCAATGGG TGCTGGAGGC AGACATTAAA GGATGCTTCG ACCATATCAG CCACGACTGG
CTGGAGCGCA ATGTCCCCAT GGACAAAGCG ATCCTTCGGA AGTGGTTGAA GGCTGGCGTG
GTATTTCAAA GCCAGTTTCA GGCGACCGAT GCTGGAACAC CACAGGGGGG CATCATTTCC
CCAACCTTGG CCAACGTGGC ACTGAATGGA CTGGAACGTG ACCTGATGAA GTTCTTACGA
ACGAAACTCG GGACTGTCCA GGCCAACAGG CTAAAGGTGA ATGTCGTGCG GTACGCGGAC
GACTTCGTGA TCACCGGCAA TACGCCGGAA GTTTTGGAGC ACGAAGTGAA GCCGTGGGTA
GAACAGTTCC TAGCAGTACG GGGACTCACT CTTTCCCCGG AGAAAACGCG AATCGTGAAC
ATCGCCGATG GCTTTGACTT CCTTGGGTGG AATTTCCGGA AGTATTCGGG AACGCTGCTC
ATCAAGCCGA GCAAGAAGAA CGCACTAGCG TTCTATCGCA GGGTCAAGGA GGTTATCAGG
ACACACCATG GGAAAAAGCC GGAGGATCTG ATCCGAACGC TGAACCCGAT GCTGAGGGGT
TGGGCACAGT ATCACGGCCC AGTGGTTGCA AAGGCGGCGT TCACCCGAAT GGAGCACCTG
ATCTTCAGGT GTCTATGGAG GTGGGCAAAA CGGCGACACC GAGGGAAGAA TACCGAGTGG
GTGCGGAAGA AGTACTTTGC CTCAATCGGA ATGCGGAACT GGGTGTTTGG AACCAACGTT
TTGGGTAAGG CTGGCGAACG CTACTGGATG GAGTTGTATT CGATACCGAG TACGCCTATT
CGGAGGCACA AGAAGGTTCG AGGGGACTAC AACCCCTTCG ACCCAGCGCA GGAAATGTAT
GGCGAAACGC TGCGGCAGGA ACGCATGGCA GAAAGCATGT CGTACCGAAA GCAGTGGGCA
AAGCTGTTCA TGTCCCAGCG GGGCTTATGC GCGGTATGCC AAGGCAAGAT AACCAAAGAG
ACAAGATGGC ATGACCATCA CATCGAACCA CGGGTTTCCG GTGGCTCGGA CGCTCTAGGG
AATCGAGTTC TGGTGCACCC CGACTGTCAT GTCCAAGTTC ACTCCTATGG TCAAGTTGCA
GTGAAGCCGG TGTTTGATTA A
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| Protein sequence | MEALIREDES APSGIPQRWG DINWRRVERN VRAMQIRIAK ATQEGDWRRV KTLQRSLTRS
FSAKASAVRR VAMNQGARTA GVDRVAWDSP EARWESIGRL KRRGYRPLPL RRVYIPKANG
KERPLGIPTL HDRAMQALYL LALEPVSEGT SDPNSYGFRI NRSTADAMSQ LFVSLSKKAS
AQWVLEADIK GCFDHISHDW LERNVPMDKA ILRKWLKAGV VFQSQFQATD AGTPQGGIIS
PTLANVALNG LERDLMKFLR TKLGTVQANR LKVNVVRYAD DFVITGNTPE VLEHEVKPWV
EQFLAVRGLT LSPEKTRIVN IADGFDFLGW NFRKYSGTLL IKPSKKNALA FYRRVKEVIR
THHGKKPEDL IRTLNPMLRG WAQYHGPVVA KAAFTRMEHL IFRCLWRWAK RRHRGKNTEW
VRKKYFASIG MRNWVFGTNV LGKAGERYWM ELYSIPSTPI RRHKKVRGDY NPFDPAQEMY
GETLRQERMA ESMSYRKQWA KLFMSQRGLC AVCQGKITKE TRWHDHHIEP RVSGGSDALG
NRVLVHPDCH VQVHSYGQVA VKPVFD
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