| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2880 |
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| Symbol | |
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| ID | 4039708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3131733 |
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| End bp | 3132392 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978280 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_585022 |
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| Protein GI | 94311812 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.449931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGAACG CTGCACCGAC TTTGTTGGTG GTCGATGATC ATCCTATGGC GCTCTCGGGC
ACAACCGCCT TCCTGGCGGA AGTGATGCCC GACGTCGCCG TTCATTCCGC TGGCAGCGCC
AAGGAAGCCC TTCACTCCCT GAACCAGGGG CTCCGTCCCG ATATCGTGCT GCTCGACATC
TGGCTGAACG ATGGTACTGG CTTCGATGCC ATGCAGTCGT TCAAGACCGT GATCCCGGGC
GCCCGCTTCA TCTTCATGTC GGCGGAGGCC ACACCCGAGA TCGTGGGACG CGCCCGCGCG
CTATCGGCCT GCGGTTTCGT CGGCAAGCAT CTGGACGCCA ACGCGTTCAC TGCGGCCGTG
CGCAAGGTCC TGGCCGGCGA CACCAGTTTT CCATCCGATG AGGCCTTGTC CGGCCGATCG
CAATCGTTCG GCCCCGCCCA CGGCATTCCC GTCACGCCGG CCGAACTCGG CCTCACGCCG
CGTCAGGGCT CGGTGCTCGC GCTGGTGCTC GAAGGACTGC CGAACAAGGT CATCGCCCGC
AAGCTGGGGC TGACCGAGAA CACCGTCAAG GAACACGTCT CCGCCATCCT GCAACGGCTG
GGCGTGCGCA CGCGCATGCA GGTCATGTCG CGCATGGAGC GTTTTCGCCT GCGCCAGTGA
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| Protein sequence | MLNAAPTLLV VDDHPMALSG TTAFLAEVMP DVAVHSAGSA KEALHSLNQG LRPDIVLLDI
WLNDGTGFDA MQSFKTVIPG ARFIFMSAEA TPEIVGRARA LSACGFVGKH LDANAFTAAV
RKVLAGDTSF PSDEALSGRS QSFGPAHGIP VTPAELGLTP RQGSVLALVL EGLPNKVIAR
KLGLTENTVK EHVSAILQRL GVRTRMQVMS RMERFRLRQ
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