| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2868 |
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| Symbol | ispH |
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| ID | 4039696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3118860 |
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| End bp | 3119852 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978268 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_585010 |
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| Protein GI | 94311800 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0402296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCCG TTGTAACGGA ACGCAGCATG ACCGAAACCA CTGTCCCTGC CGATGCCGAG
ATCCTGATGG CGCAGCCGCG CGGCTTCTGC GCGGGCGTCG ATCGTGCGAT CGAAATCGTC
GAACGCGCGC TGTCGCGGTT CGGCGCTCCT ATCTATGTGC GCCACGAGAT CGTCCACAAC
GCCTACGTGG TGGCCGACCT GCGCAAGAAA GGCGCGATCT TCGTCGACGA GCTCGACGAA
GTGCCGCAGG GCTCGACGGT TATCTTCAGC GCCCATGGCG TATCGAAGGA AGTGCGCGCC
GACGCCACAG CGCGAGGTCT GACCGTTTTC GATGCCACCT GCCCGCTGGT GACCAAGGTG
CACGTGGAAG TCGGCAAGAT GCGCGGCGAG GGTTGCGAGA TCATCATGAT CGGCCACCGG
GGCCACCCCG AAGTGGAAGG CACGATGGGC CAATCCGAAC ACGGGATGCT GCTGGTGGAA
TCGGTGGACG ACGTGAATCG TCTGGTCGTT GCCGATCCGC AACAACTGGC CTACGTCACG
CAGACCACGC TGTCGGTGGA CGAAACCGCC GAGATCGTGG CCGCGCTCAA GGTCCGCTTC
CCGCAGATCC GCGAGCCGAA GAAGCAGGAC ATCTGCTACG CGACGCAGAA CCGCCAGGAC
GCCGTGAAGT TCATGGTGCC GCAGGTGGAA GTGGTGATCG TGGTGGGCAG CCCGAACAGC
TCGAACTCGA ACCGCCTGCG CGAACTGGCC GACCGTCTGG GCGTGCCGGC GTACATGGTG
GACGATCCGG AACAGCTCAA GCCGGAATGG GTGACTGGCA AGCGCCGCAT TGGCCTGACA
GCCGGCGCCT CGGCGCCCGA GGCGCTCGCC CAGGCAATCG TCGAGCGTCT GCGGACCTTC
GGCGTCAAGA GCGTGCGTGC GCTCGAGGGC GTGGAAGAGA ACATGTCGTT CCCGCTGCCG
CGCGGCCTGG CCAGCGTGTC GGTCCAGTCC TGA
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| Protein sequence | MSAVVTERSM TETTVPADAE ILMAQPRGFC AGVDRAIEIV ERALSRFGAP IYVRHEIVHN
AYVVADLRKK GAIFVDELDE VPQGSTVIFS AHGVSKEVRA DATARGLTVF DATCPLVTKV
HVEVGKMRGE GCEIIMIGHR GHPEVEGTMG QSEHGMLLVE SVDDVNRLVV ADPQQLAYVT
QTTLSVDETA EIVAALKVRF PQIREPKKQD ICYATQNRQD AVKFMVPQVE VVIVVGSPNS
SNSNRLRELA DRLGVPAYMV DDPEQLKPEW VTGKRRIGLT AGASAPEALA QAIVERLRTF
GVKSVRALEG VEENMSFPLP RGLASVSVQS
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