Gene Rmet_2865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2865 
Symbol 
ID4039693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3114659 
End bp3115813 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content62% 
IMG OID637978265 
Productinner-membrane translocator 
Protein accessionYP_585007 
Protein GI94311797 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.267921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.620309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTC CGATTCCATC CACGGCCGTG GCGGCGCCGT CGCGCGTGCC GGCCAAGACG 
CTGGCCGCGC TGGTCGGCTT CCTGGTGGTC GCGCTCTGCG CGCCGTTCTT CGTCCAGACC
TTTGGCGGCA ATTACTGGGT GCGCGTGCTC GACTTCGCGC TGCTCTACAT CATGCTGGCG
CTGGGCCTGA ACATCGTGGT CGGCTTTGCC GGTCTGCTTG ATCTGGGCTA CATCGCGTTC
TACGCGGTAG GCGCCTACAT GATGGCGTTG CTCGGCTCGC CTCACCTGTC CAATCAGTTC
GAGTGGATCC ACCAGTTGTT CCCTAACGGA CTGCACCTGT CGATGTGGTT CGTCCTGCCA
ATCGCGGTGG TGGTGGCGGC CACGTTCGGC GTGCTGCTGG GTGCGCCAAC GCTGAAGCTA
CGCGGGGATT ACCTGGCCAT CGTGACACTG GGCTTCGGCG AGATCGTCCG CATCTTCATG
AACAACCTGG ACCGTCCGGT GAACATCACC AACGGCCCCA AGGGCATCAC GGCAGTGGAC
CCGGTCCACA TCTTCGGTTT CGACTTCTCG AAGTCGCACG AGATCTTCGG GCTCAAGTTC
ACACCGGTGT TCATGTACTA CTACCTGCTG GTGGCGCTGG TCATTGTCAT CGTGTTTATC
TGCCTGCGAT TGCAGAACTC GCGTATCGGC CGTGCCTTCG TGGCCATCCG CGAAGACGAA
ATCGCCGCCA AGGCGATGGG TATCAACACG CGCAACATCA AGCTGCTGGC CTTTGCCATG
GGTGCCTCGT TTGGCGGTGC ATCGGGTGCG ACTTTCGGCG CATTCCAGGG CTTCGTCTCG
CCGGAATCGT TCACGTTGTG GGAATCGATC TACGTCCTGG CGATTGTGGT GCTGGGCGGC
ATGGGCCACA TCCCGGGCGT GATCCTGGGC GGCATCCTTC TGGTGGGCTT CCAGGAGCTG
TTGCGTGCCG TGGCGGAACC GATCCAGACC GGCATCTTCG GCCAGGTCAT TGTCGATGCC
GAAGTGCTGC GCCAGTTGTT GTTCGGTCTG GCCCTGGTGG GCGTGATGCT GTATCGCCCG
GCCGGCCTGT GGCCATCGCC ACGCAAGGAA GACCGCCCAG TTGTGCGTCG TGCCGGCAGT
GTCGGTCGTT TCTGA
 
Protein sequence
MNTPIPSTAV AAPSRVPAKT LAALVGFLVV ALCAPFFVQT FGGNYWVRVL DFALLYIMLA 
LGLNIVVGFA GLLDLGYIAF YAVGAYMMAL LGSPHLSNQF EWIHQLFPNG LHLSMWFVLP
IAVVVAATFG VLLGAPTLKL RGDYLAIVTL GFGEIVRIFM NNLDRPVNIT NGPKGITAVD
PVHIFGFDFS KSHEIFGLKF TPVFMYYYLL VALVIVIVFI CLRLQNSRIG RAFVAIREDE
IAAKAMGINT RNIKLLAFAM GASFGGASGA TFGAFQGFVS PESFTLWESI YVLAIVVLGG
MGHIPGVILG GILLVGFQEL LRAVAEPIQT GIFGQVIVDA EVLRQLLFGL ALVGVMLYRP
AGLWPSPRKE DRPVVRRAGS VGRF