Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2865 |
Symbol | |
ID | 4039693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3114659 |
End bp | 3115813 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637978265 |
Product | inner-membrane translocator |
Protein accession | YP_585007 |
Protein GI | 94311797 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.267921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.620309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATACTC CGATTCCATC CACGGCCGTG GCGGCGCCGT CGCGCGTGCC GGCCAAGACG CTGGCCGCGC TGGTCGGCTT CCTGGTGGTC GCGCTCTGCG CGCCGTTCTT CGTCCAGACC TTTGGCGGCA ATTACTGGGT GCGCGTGCTC GACTTCGCGC TGCTCTACAT CATGCTGGCG CTGGGCCTGA ACATCGTGGT CGGCTTTGCC GGTCTGCTTG ATCTGGGCTA CATCGCGTTC TACGCGGTAG GCGCCTACAT GATGGCGTTG CTCGGCTCGC CTCACCTGTC CAATCAGTTC GAGTGGATCC ACCAGTTGTT CCCTAACGGA CTGCACCTGT CGATGTGGTT CGTCCTGCCA ATCGCGGTGG TGGTGGCGGC CACGTTCGGC GTGCTGCTGG GTGCGCCAAC GCTGAAGCTA CGCGGGGATT ACCTGGCCAT CGTGACACTG GGCTTCGGCG AGATCGTCCG CATCTTCATG AACAACCTGG ACCGTCCGGT GAACATCACC AACGGCCCCA AGGGCATCAC GGCAGTGGAC CCGGTCCACA TCTTCGGTTT CGACTTCTCG AAGTCGCACG AGATCTTCGG GCTCAAGTTC ACACCGGTGT TCATGTACTA CTACCTGCTG GTGGCGCTGG TCATTGTCAT CGTGTTTATC TGCCTGCGAT TGCAGAACTC GCGTATCGGC CGTGCCTTCG TGGCCATCCG CGAAGACGAA ATCGCCGCCA AGGCGATGGG TATCAACACG CGCAACATCA AGCTGCTGGC CTTTGCCATG GGTGCCTCGT TTGGCGGTGC ATCGGGTGCG ACTTTCGGCG CATTCCAGGG CTTCGTCTCG CCGGAATCGT TCACGTTGTG GGAATCGATC TACGTCCTGG CGATTGTGGT GCTGGGCGGC ATGGGCCACA TCCCGGGCGT GATCCTGGGC GGCATCCTTC TGGTGGGCTT CCAGGAGCTG TTGCGTGCCG TGGCGGAACC GATCCAGACC GGCATCTTCG GCCAGGTCAT TGTCGATGCC GAAGTGCTGC GCCAGTTGTT GTTCGGTCTG GCCCTGGTGG GCGTGATGCT GTATCGCCCG GCCGGCCTGT GGCCATCGCC ACGCAAGGAA GACCGCCCAG TTGTGCGTCG TGCCGGCAGT GTCGGTCGTT TCTGA
|
Protein sequence | MNTPIPSTAV AAPSRVPAKT LAALVGFLVV ALCAPFFVQT FGGNYWVRVL DFALLYIMLA LGLNIVVGFA GLLDLGYIAF YAVGAYMMAL LGSPHLSNQF EWIHQLFPNG LHLSMWFVLP IAVVVAATFG VLLGAPTLKL RGDYLAIVTL GFGEIVRIFM NNLDRPVNIT NGPKGITAVD PVHIFGFDFS KSHEIFGLKF TPVFMYYYLL VALVIVIVFI CLRLQNSRIG RAFVAIREDE IAAKAMGINT RNIKLLAFAM GASFGGASGA TFGAFQGFVS PESFTLWESI YVLAIVVLGG MGHIPGVILG GILLVGFQEL LRAVAEPIQT GIFGQVIVDA EVLRQLLFGL ALVGVMLYRP AGLWPSPRKE DRPVVRRAGS VGRF
|
| |