| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2864 |
|---|
| Symbol | |
|---|
| ID | 4039692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3113869 |
|---|
| End bp | 3114645 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637978264 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_585006 |
|---|
| Protein GI | 94311796 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.150555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATT CCGATTTCCT CCTGTCCGTA CAGGGGGTCA ACAAACGTTT TGGCGGCCTG
CAGGCACTGT CCGATGTGGG CCTGCAAATC AATCCGGGTG AGATCTATGG GCTTATCGGC
CCGAACGGCG CCGGCAAGAC CACGTTCTTC AATGTGATCA CGGGCCTGTA TACGCCGGAC
TCCGGCGAGT TCGTGCTGGG CGGCAAGCCG TATCAGCCGA CTGCCGTGCA CGAAGTGGCC
AAGGCTGGCA TCGCGCGCAC GTTCCAGAAC ATCCGCCTGT TCGGCGACAT GACCGCGCTG
GAAAACGTGA TGGTGGGCCG GCACGTGCGC ACCAAGGCAG GCCTGTTCGG CGCCATCTTC
CGTCCGCCTG CAGTGCGTCA GGAAGAAGAG GCCGTTGAAG ACATGGCCCA CGATCTGCTC
GAGTACGTTG GCATCGGCAA GTACGCCAAC TTCACGTCGC GCAACCTGTC GTACGGCCAC
CAGCGTCGTC TGGAGATCGC CCGCGCGCTG GCCACCGAGC CAAAGCTTCT GGCGCTGGAT
GAACCCGCCG CCGGCATGAA CGCCACCGAG AAGGTGGAGT TGCGTGGCTT GCTGGAGAAG
ATCAAGAACG ATGGCAAGAC CATCCTGTTG ATCGAACACG ACGTCAAGCT TGTGATGGGC
TTGTGCAACC GCCTCACCGT GCTGGACTAC GGCAAGGTCA TCGCGCAGGG CCTGCCGCAC
GAAGTGCAGA ACAATCCTGC CGTGATCGAG GCTTACCTCG GCGCAGCGGC GCACTAA
|
|---|
| Protein sequence | MSNSDFLLSV QGVNKRFGGL QALSDVGLQI NPGEIYGLIG PNGAGKTTFF NVITGLYTPD
SGEFVLGGKP YQPTAVHEVA KAGIARTFQN IRLFGDMTAL ENVMVGRHVR TKAGLFGAIF
RPPAVRQEEE AVEDMAHDLL EYVGIGKYAN FTSRNLSYGH QRRLEIARAL ATEPKLLALD
EPAAGMNATE KVELRGLLEK IKNDGKTILL IEHDVKLVMG LCNRLTVLDY GKVIAQGLPH
EVQNNPAVIE AYLGAAAH
|
|---|
| |