Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2863 |
Symbol | |
ID | 4039691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3113136 |
End bp | 3113852 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637978263 |
Product | ABC transporter-related protein |
Protein accession | YP_585005 |
Protein GI | 94311795 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.113573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA CGATCCTGAA GATCTCGGGC CTGAAGGTGG CCTACGGCGG CATCCAGGCC GTCAAGGGCG TGGACCTGGA TATTAAAGAC GGCGAACTCG TGACGCTGAT CGGCGCCAAC GGCGCCGGCA AGACCACCAC CATGAAGGCC ATCACCGGCC TGCAGGGCTG GGCCGGCGGC GACGTGGAGT ACATGGGCAA GTCGATCAAG GGCGTGCCCA GCTATGCGCT GCTCAAGCAA GGGCTGGCGA TGGTGCCGGA AGGCCGCGGC GTGTTCGCGC GCATGACGAT CACCGAGAAC CTGCAGATGG GTGCGTACAC GCGCAACGAC GAGGCCGGCA TCAAGGCCGA CATCGACCGT ATGTTCGAAA CGTTCCCGCG CCTGAAGGAG CGTGCCAACC AGCTTGCCGG CACGATGTCT GGCGGCGAGC AGCAGATGCT GGCCATGGCC CGCGCGCTGA TGAGCCAGCC GAAGCTGTTG TTGCTGGATG AGCCGTCGAT GGGTCTCTCG CCGATCATGG TCGAGAAGAT CTTTGAGGTG GTACGCACGG TGTCGTCGCA GGGCGTGACC GTTCTGCTGG TCGAGCAGAA CGCGCGCCTG GCGCTGCAGG CGGCCCATCG CGGCTACGTA ATGGAGTCTG GACTGATCAC GATGAGCGGC GACGCAAAGC AGATGCTCGA CGATCCGAAG GTGCGGGCCG CGTATCTGGG GGAGTAA
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Protein sequence | MTQTILKISG LKVAYGGIQA VKGVDLDIKD GELVTLIGAN GAGKTTTMKA ITGLQGWAGG DVEYMGKSIK GVPSYALLKQ GLAMVPEGRG VFARMTITEN LQMGAYTRND EAGIKADIDR MFETFPRLKE RANQLAGTMS GGEQQMLAMA RALMSQPKLL LLDEPSMGLS PIMVEKIFEV VRTVSSQGVT VLLVEQNARL ALQAAHRGYV MESGLITMSG DAKQMLDDPK VRAAYLGE
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