Gene Rmet_2855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2855 
Symbol 
ID4039683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3104066 
End bp3105634 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content68% 
IMG OID637978255 
Producthistidine ammonia-lyase 
Protein accessionYP_584997 
Protein GI94311787 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.288537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA CCCAAGATTC CCGACCGCTC CTGACGCTGA ACCCCGGCCA CGTGTCGCTG 
GATGACCTGC GCCGCATCCA TCGTGGCGAA GTGCGACTGG CGATGGCGGA GTCGGCGTGG
GCCGGCGTGC GTGCCGCGCA GGCCACCGTG CAGGACATCA TCGACGCCGA CGCGGTGGTC
TATGGCATCA ATACCGGCTT CGGCAAGCTT GCCCAGTCGC GCATCGCGCA CGACAAGCTC
GCCGAACTGC AACGCAATCT GGTGCTCTCG CACAGCGTGG GTACGGGCTC CGACCTGTCC
GTCGATACCG TGCGGCTGAT CCTGGCCATC AAGGCTGTCA GCCTCGCGCG TGGGCATTCG
GGCGTGCGCC CCGAACTGAT CGAAGCGCTG CTGGCGCTGG CCAACCACGG CGTGACGCCG
TGCATCCCCG CCAAGGGCTC GGTCGGCGCA TCGGGCGATC TGGCGCCGCT GGCCCATATG
TCCTGCACGC TGATCGGCGT GGGCGATGTG TATGTCGACG GCCAGCGCGT GCCGGCTGCG
CAGGGTCTGG TCCATGCGGG GCTCGCCGCC TTCACGCTGG GCCCGAAGGA AGGTCTGGCG
CTGCTCAACG GCACGCAGGT TTCCACCGCT CTGGCCCTGG CCGGCCTGTT CGCCGCGGAG
GACGCCTTCG CGGCCGGACT GGTGGCGGGC GCGCTGTCGC TCGAAGCGAT CAAGGGATCG
GTCAAGCCGT TCGATGCTCG CATTCACGCG GCACGCGGCC AGGCGGGCCA GATCGCCGTG
GCCGGCGCGG CACGCGCGAT GCTTGATGGC AGCGAGATCG TCGACTCGCA CAAGATGTGC
GGCCGGGTGC AGGACCCGTA CTCGATCCGC TGCCAGCCGC AGGTGATGGG CGCGTGCCTG
GACAACCTGA CCCATGCCGC CCGCATCCTG CGCATCGAAG CCAACGCGGC ATCCGACAAT
CCGCTGGTGT TCTCCGAACA GGGTGATGTG GTCTCCGGCG GCAACTTCCA CGCGGAGTCG
GTGGCCTTTG CCGCCGACAT CATCGCACTG GCGATCGCCG AGATCGGCGC AATCTCGGAA
CGCCGCCTTG CGCTGCTGCT CGACACCGGC CTGTCGGGCC TGCCGCCGTT CCTGGTGCGC
GATGGCGGCC TGAACTCCGG ATTCATGATC GCGCAGGTCA CGGCCGCGGC GTTGGCGTCC
GAGAACAAGT CGCTGGCCCA TCCGTCCAGC GTGGACAGCC TGCCCACTTC GGCCAACCAG
GAGGACCATG TGTCGATGGC CACCTACGGC GCGCGCCGCC TGGGCGAGAT GGCGGCCAAC
ACCGCTGTGA TCGTCGGCAT CGAGGCGATG GCCGCCGCGC AGGGTATCGA ATTTCATCGA
CCGCTCAAGT CGTCGCCGCT GGTGGAGCAG GAACTGGCGC GTATCCGCGC GCGCGTGGCG
TTCGTCGAAG CCGATCGCTA TCTCGCGCCG GACATCGAGG CCATGAAGCA GTGGGTGGTT
CAAGGCGATG CGGGCGCGGG CTGGCCTGAC GCCGTGCGGG AGATCTTGCC GACGAACGTC
GGCGCATGA
 
Protein sequence
MTMTQDSRPL LTLNPGHVSL DDLRRIHRGE VRLAMAESAW AGVRAAQATV QDIIDADAVV 
YGINTGFGKL AQSRIAHDKL AELQRNLVLS HSVGTGSDLS VDTVRLILAI KAVSLARGHS
GVRPELIEAL LALANHGVTP CIPAKGSVGA SGDLAPLAHM SCTLIGVGDV YVDGQRVPAA
QGLVHAGLAA FTLGPKEGLA LLNGTQVSTA LALAGLFAAE DAFAAGLVAG ALSLEAIKGS
VKPFDARIHA ARGQAGQIAV AGAARAMLDG SEIVDSHKMC GRVQDPYSIR CQPQVMGACL
DNLTHAARIL RIEANAASDN PLVFSEQGDV VSGGNFHAES VAFAADIIAL AIAEIGAISE
RRLALLLDTG LSGLPPFLVR DGGLNSGFMI AQVTAAALAS ENKSLAHPSS VDSLPTSANQ
EDHVSMATYG ARRLGEMAAN TAVIVGIEAM AAAQGIEFHR PLKSSPLVEQ ELARIRARVA
FVEADRYLAP DIEAMKQWVV QGDAGAGWPD AVREILPTNV GA