Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2855 |
Symbol | |
ID | 4039683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3104066 |
End bp | 3105634 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637978255 |
Product | histidine ammonia-lyase |
Protein accession | YP_584997 |
Protein GI | 94311787 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.288537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGA CCCAAGATTC CCGACCGCTC CTGACGCTGA ACCCCGGCCA CGTGTCGCTG GATGACCTGC GCCGCATCCA TCGTGGCGAA GTGCGACTGG CGATGGCGGA GTCGGCGTGG GCCGGCGTGC GTGCCGCGCA GGCCACCGTG CAGGACATCA TCGACGCCGA CGCGGTGGTC TATGGCATCA ATACCGGCTT CGGCAAGCTT GCCCAGTCGC GCATCGCGCA CGACAAGCTC GCCGAACTGC AACGCAATCT GGTGCTCTCG CACAGCGTGG GTACGGGCTC CGACCTGTCC GTCGATACCG TGCGGCTGAT CCTGGCCATC AAGGCTGTCA GCCTCGCGCG TGGGCATTCG GGCGTGCGCC CCGAACTGAT CGAAGCGCTG CTGGCGCTGG CCAACCACGG CGTGACGCCG TGCATCCCCG CCAAGGGCTC GGTCGGCGCA TCGGGCGATC TGGCGCCGCT GGCCCATATG TCCTGCACGC TGATCGGCGT GGGCGATGTG TATGTCGACG GCCAGCGCGT GCCGGCTGCG CAGGGTCTGG TCCATGCGGG GCTCGCCGCC TTCACGCTGG GCCCGAAGGA AGGTCTGGCG CTGCTCAACG GCACGCAGGT TTCCACCGCT CTGGCCCTGG CCGGCCTGTT CGCCGCGGAG GACGCCTTCG CGGCCGGACT GGTGGCGGGC GCGCTGTCGC TCGAAGCGAT CAAGGGATCG GTCAAGCCGT TCGATGCTCG CATTCACGCG GCACGCGGCC AGGCGGGCCA GATCGCCGTG GCCGGCGCGG CACGCGCGAT GCTTGATGGC AGCGAGATCG TCGACTCGCA CAAGATGTGC GGCCGGGTGC AGGACCCGTA CTCGATCCGC TGCCAGCCGC AGGTGATGGG CGCGTGCCTG GACAACCTGA CCCATGCCGC CCGCATCCTG CGCATCGAAG CCAACGCGGC ATCCGACAAT CCGCTGGTGT TCTCCGAACA GGGTGATGTG GTCTCCGGCG GCAACTTCCA CGCGGAGTCG GTGGCCTTTG CCGCCGACAT CATCGCACTG GCGATCGCCG AGATCGGCGC AATCTCGGAA CGCCGCCTTG CGCTGCTGCT CGACACCGGC CTGTCGGGCC TGCCGCCGTT CCTGGTGCGC GATGGCGGCC TGAACTCCGG ATTCATGATC GCGCAGGTCA CGGCCGCGGC GTTGGCGTCC GAGAACAAGT CGCTGGCCCA TCCGTCCAGC GTGGACAGCC TGCCCACTTC GGCCAACCAG GAGGACCATG TGTCGATGGC CACCTACGGC GCGCGCCGCC TGGGCGAGAT GGCGGCCAAC ACCGCTGTGA TCGTCGGCAT CGAGGCGATG GCCGCCGCGC AGGGTATCGA ATTTCATCGA CCGCTCAAGT CGTCGCCGCT GGTGGAGCAG GAACTGGCGC GTATCCGCGC GCGCGTGGCG TTCGTCGAAG CCGATCGCTA TCTCGCGCCG GACATCGAGG CCATGAAGCA GTGGGTGGTT CAAGGCGATG CGGGCGCGGG CTGGCCTGAC GCCGTGCGGG AGATCTTGCC GACGAACGTC GGCGCATGA
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Protein sequence | MTMTQDSRPL LTLNPGHVSL DDLRRIHRGE VRLAMAESAW AGVRAAQATV QDIIDADAVV YGINTGFGKL AQSRIAHDKL AELQRNLVLS HSVGTGSDLS VDTVRLILAI KAVSLARGHS GVRPELIEAL LALANHGVTP CIPAKGSVGA SGDLAPLAHM SCTLIGVGDV YVDGQRVPAA QGLVHAGLAA FTLGPKEGLA LLNGTQVSTA LALAGLFAAE DAFAAGLVAG ALSLEAIKGS VKPFDARIHA ARGQAGQIAV AGAARAMLDG SEIVDSHKMC GRVQDPYSIR CQPQVMGACL DNLTHAARIL RIEANAASDN PLVFSEQGDV VSGGNFHAES VAFAADIIAL AIAEIGAISE RRLALLLDTG LSGLPPFLVR DGGLNSGFMI AQVTAAALAS ENKSLAHPSS VDSLPTSANQ EDHVSMATYG ARRLGEMAAN TAVIVGIEAM AAAQGIEFHR PLKSSPLVEQ ELARIRARVA FVEADRYLAP DIEAMKQWVV QGDAGAGWPD AVREILPTNV GA
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