| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2827 |
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| Symbol | |
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| ID | 4039655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3073902 |
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| End bp | 3076157 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637978227 |
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| Product | putative TraY/DotA-like type IV secretion system protein |
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| Protein accession | YP_584969 |
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| Protein GI | 94311759 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGGC GCATACTCAC TATCGCGCTC GCGCTCGGGC TGACCGCCGG CGTTGCTTAT
GCTGACTCCC CGACCGGCAT GTCGCTCAAC CAATTCACCC CGCCGGCAGG CGACACCTCC
GTCGACTTCT TGCGAGAGGT ATTCGGGAAC ATCATCGGGC TGATCTCATC CGGCGGGAAC
GTCAGCGGCG GGCAGAACGA CGACGTTCTG GGCGCGATGA TGAAGGTCTT CAATGCCGCC
GTCCTCTTCC TGGGCATGCT GTTCATCGCT TACACGACCA TCAAGGGCAC GATCGACTCA
GCGCACGACG GAGAGGTTCT CGGCAAGAGC ATGAAGTCGC CTTACGTGAT CCTGCGCAGC
GTCGCCGGCA CCGCCCTCCT ACTGCCGCTC GGCTCTGGTT ACTCGCTGAT CCAGATCGGC
ATACTCTGGC TCGCGCTGCA AGGCGTCGGC GTCGCCGATG CCATCTGGAA GGCCGCGATC
GAGCAAATCA ACCGGGACAA CATGATCTCC CGCCCGATGA TCCCGGATTC TCGCCCCCTG
GCCGCCAACA TCCTCAAATT CGAAGTCTGC GCGGCCGCGA TGAACAAACA GTTCCAGGAC
TCCGGCCGCG GCACCAGAGT TCATCCGGTG CCGTCCACGC AGGTCATGAT GAATAGCGGT
GAGCTGCTGA ACTATGACGT CTTCGATGCG ATACCCGTCG TCGGTGCCTA CACGACCATC
AAGAATCTGT CGAATGCCAA GTACACGGTG AGCAACTACC AGTGGAAAGC CAATGACAAT
AGCTACGTCA ACCCGACGGT CTGCGGCGGA ATCTCCTGGA AGCAGTCATG GGAGGCGTCC
GAAGGCAACA GCAATACAAA GGTAATCAAA GAGCCGATCA TGACTGCACA CGCTCAGGCT
GTGCAGCGCA TGATCCAGGA GCTGCAGCCG ACCGCCAACC AGATTGTTGC CGGGCAAAAG
CCCACTCCGG GTGCGATTGA TACGGCGGCA AACAATTACG AGAATACGCT GCGTGACGCG
GCGAAGAACG CCGTATCGCA AACGAACGAC CGGGCCCGCA GTGACTTCCT GCAAGCCGCC
AAAGATGGGG GCTGGATCTT CGCCGGCACC TGGTACAACC ACATCGTCAA GATGAATGAC
GTGATGCAGT CCACGCTGAA CGGGCTACCC ACGTCTGAAC CAATCGATAT CACGGACAAG
GAAACGCAGG AGGTCCTGCA GACCTACCAG GATGCGATGG CCACCGCCAA CGAGTACACG
AAGCATCGGG TCGAGGGCAT CCGCCAGGTC TACTACAACC AGACCGACGT GCGCGCGCCC
CAGCAAGGCG AGGGCGCGTG GGAGTATGTG AGAAAGCTGA TGTCCACCCC GTTCATGGGC
GCGATCAATC AGATGACGCA GGAAATCGCC GGCTCGAACC TGAATCACAT GAGCCAGATG
AAGTCGTTTG GAGATTCAAT CGCCGGCACT GGTGAAGCTC TCCTGGTTGG CATGGCCGGC
GCGACGGGTG TTGCGAACTC TTGGTTCGCG CAAGGCACGG CGAAGACTGG GTTCGACGCA
GCCGCGGTGT TGCAGTTCCT GTCGGGCATG GTGACCACAA TCGTGATCGC TTTGTTCTTT
TTTGGAGCTG TGCTATCGAG CTATGTCCCT ATGATCCCGT TCATCACTTG GATGACCTCG
GTGGTGAACT GGTTCGTGCT GGCGCTCGAG TCTGTGATTG CGGGTCCTCT GTTCGCCGTC
GCCCACATTC ATCCGGACGG CGACGACGCC GTAGGGAAGG CAGGGAACGG CTACATGATG
ATTCTGTCGC TCGTGATGCG ACCGGCACTG ATGTTGTTCG GCCTGATCGG AGGCATGCTT
CTAACGCAGC CAGTGGTGGG ACTGATCAAT GTCGCATTTA TGACGGTCGT CGCCGGCATC
CAGGCCGATT CCATGACCGG CATCGTTTCG TTTTTCGCGT ATGTCACCAT CTACGTGATC
ATCATGACCA CGGTGGTACA CATCGTGTTC TCGCTCATCC ACTGGATTCC GGACAATATC
CTCCGCTGGC TTGGCGCACA TGCTGGTGGC ATCGGCTCTG CCGAGCGAGC AGGCGAACAA
GGCCACGACA TTTTGGTCGG TGGGGTACGC GAGGTTAAAC ACGGGGCTGG CGGTCTCGGG
GGCGGCAGCC AGAAGCGACC AAGTGGTGGC TCGGGAGCGG GTGGTGAGCT CAGACCAAGC
GCGTCACCAT CAAATAAGGA CCTTCTTGGT GACTGA
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| Protein sequence | MIRRILTIAL ALGLTAGVAY ADSPTGMSLN QFTPPAGDTS VDFLREVFGN IIGLISSGGN
VSGGQNDDVL GAMMKVFNAA VLFLGMLFIA YTTIKGTIDS AHDGEVLGKS MKSPYVILRS
VAGTALLLPL GSGYSLIQIG ILWLALQGVG VADAIWKAAI EQINRDNMIS RPMIPDSRPL
AANILKFEVC AAAMNKQFQD SGRGTRVHPV PSTQVMMNSG ELLNYDVFDA IPVVGAYTTI
KNLSNAKYTV SNYQWKANDN SYVNPTVCGG ISWKQSWEAS EGNSNTKVIK EPIMTAHAQA
VQRMIQELQP TANQIVAGQK PTPGAIDTAA NNYENTLRDA AKNAVSQTND RARSDFLQAA
KDGGWIFAGT WYNHIVKMND VMQSTLNGLP TSEPIDITDK ETQEVLQTYQ DAMATANEYT
KHRVEGIRQV YYNQTDVRAP QQGEGAWEYV RKLMSTPFMG AINQMTQEIA GSNLNHMSQM
KSFGDSIAGT GEALLVGMAG ATGVANSWFA QGTAKTGFDA AAVLQFLSGM VTTIVIALFF
FGAVLSSYVP MIPFITWMTS VVNWFVLALE SVIAGPLFAV AHIHPDGDDA VGKAGNGYMM
ILSLVMRPAL MLFGLIGGML LTQPVVGLIN VAFMTVVAGI QADSMTGIVS FFAYVTIYVI
IMTTVVHIVF SLIHWIPDNI LRWLGAHAGG IGSAERAGEQ GHDILVGGVR EVKHGAGGLG
GGSQKRPSGG SGAGGELRPS ASPSNKDLLG D
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