Gene Rmet_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2821 
Symbol 
ID4039648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3069020 
End bp3069889 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID637978220 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_584963 
Protein GI94311753 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG TAGCATTTAT TGGCCTTGGC GCGATGGGCG CGCCGATGGT GGGCCACCTG 
ATCCGCGCCG GCCATACCGT GCGCGCCTTC GTGCGCCGAC CCGAAGCAGC CGATGCCGCG
CGCCAGTTGG GCGCGGAACC GTTCTTCACG CCCGCGGAAG CCGCGCAAGG CGCGGCCGTC
GTCTTCACTA ACGTGACATC GTCCGAGGAC GTGCGCGAAG TGCTGCTCGG CCGGAACGGC
GTGGTGGAAG GCGCCGCGCC AGGCACGATC TGCGTCGATC ACAGCACCAT CTCGCCGATC
GTCACGCGCG AGATAGCGCA AGCGCTGGCA GCGTGCGGCA TCGAGGCGCT GGACTGTCCG
GTATCGGGCG GCACGGTGGG AGCGCAGGCC GCCACGCTGA CGATCATGGT CGGCGGCAAG
GCCGAGGTGT TGGAAAAGGT GCGTCCGCTG CTGGAGCAGA TCGGCAAGAC CATCACGCAC
ATTGGCGACA GCGGCGCAGG CCAGGTGGCC AAGCTGTGCA ACCAGATCGC TCAGGTGGTC
AATATCGAAG GCATCGCCGA AGCCATGCGC TTTGCCGGCG CGCAGGGCGT GGACACTGCC
AAGGTGTTCC AGGCAATGTC CACCGGCATG GCCGGCAGCC GTATGCTCGA CATGCTCGGC
CCGAAGATGG TGACGCGCGA TTTCTCCGCT GGCATAGAGT CGCGGCTCCA CGCCAAGGAT
TTCGGACTCG CGGCGGACAT CGCCACCGAG ATTGGGCTTG AGTTGCCGGC GATGCGCGCC
ACGTCGGCGC AACTCGGCGA GTTGATGGAT CAGGGCTGGG GCAAGGACGA TACGTCGTCG
CTGCTGAAGG TGCTGGAGCT GAAGGGCTGA
 
Protein sequence
MTTVAFIGLG AMGAPMVGHL IRAGHTVRAF VRRPEAADAA RQLGAEPFFT PAEAAQGAAV 
VFTNVTSSED VREVLLGRNG VVEGAAPGTI CVDHSTISPI VTREIAQALA ACGIEALDCP
VSGGTVGAQA ATLTIMVGGK AEVLEKVRPL LEQIGKTITH IGDSGAGQVA KLCNQIAQVV
NIEGIAEAMR FAGAQGVDTA KVFQAMSTGM AGSRMLDMLG PKMVTRDFSA GIESRLHAKD
FGLAADIATE IGLELPAMRA TSAQLGELMD QGWGKDDTSS LLKVLELKG