Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2820 |
Symbol | |
ID | 4039647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3067829 |
End bp | 3068998 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637978219 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_584962 |
Protein GI | 94311752 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTGC GCAAGCTGCT GCTGCCAGTG ATGTCCATGT TGTCTTTTGG TGTCGCCACG GGGTCGGCCC ATGCCGATAT CCGCGTCGGC GTCGACCTGT CGACCACAGG CCCCGCCGCC GCGATCGGCA TCCCGTCGCG CAACACGGTG CAGATGTGGC CGCAGACGCT TGGCGGCCAG CGCGCGCAGT ACATCGTGCT CGACGACGCC ACTGACCCGG CTGCTGCCGT GCGCAACGTG CGCAAGCTCA TCGCCGAGGA CAAGGTCGAT GTGATCGTCG GCCCCAACAT CACGCCAAAC GCGATTGCCG CGCTCGACGC CATTGCCGAG AGCGGGACGC CGATGGTGGC GCTGGCCGCC TCGGCTTCAA TCATCGAGCC GGCCGGCGAC GCACGGCGCC GCTGGGCATT CAAGATGCCG CAGAACGACG CCCTGATGGC GACGATCCTG ACCGAGCACA TGACCAACCA GGGCGTGAAG ACGGTGGGCT TCATCGGCTT CAACGATGCC TACGGCGAAA GTTGGTGGCG CGAGTTTTCG AAGATGGCCG AGATCCGTCG CCTGCGCGTG GTGGGCAACG AGCGCTTCGG GCGCACCGAT ACGTCGGTGA CCGGGCAGAT ACTGAAGCTG ATGTCGGCGA ATCCGGATGC CATCCTGATT GCGGGCTCGG GCACGCCGGC AGTGCTGCCT CAGAAGACAC TCGGCGAGCG CGGCTACAAG GGCCGCATCT ACCAGACCCA CGGCATTGCG TCGTGGGACT TCCTGCGCGT GGGTGGCAAG GACGTCGAGG GCACACTCTT TCCGACCGGG CCAGTGGTGG TAGCGCGGCA GTTGCCCGAT AGCCATCCGG TGAAGAAGGT GGCGCTCGAT TTCGTCACGC GCTATGAAGC GAAGTACGGC CCGGATACGG TGACGCAGTT TGCTGGCGAT GCATGGGGCG CATGGCTGCT GCTCGACGAT GCCAGCCGAC GCGCGCTCAA GAGCGGCGCG CAGCCAGGCA CGCCAGCGTT CCGCGCCGCG CTGCGTGACG CGATCGAATC GACGCACAAC CTGACCGTGC CCAATGGCGT GCTCAACCTG AGCGCGCAGG ATCATCAAGG TTTCGACCAG CGTGCCCGCG TGATGGGCGT GGTGCGCAAT GGCAAGTTCG CCTACGCAGG CGACAAGTAA
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Protein sequence | MRLRKLLLPV MSMLSFGVAT GSAHADIRVG VDLSTTGPAA AIGIPSRNTV QMWPQTLGGQ RAQYIVLDDA TDPAAAVRNV RKLIAEDKVD VIVGPNITPN AIAALDAIAE SGTPMVALAA SASIIEPAGD ARRRWAFKMP QNDALMATIL TEHMTNQGVK TVGFIGFNDA YGESWWREFS KMAEIRRLRV VGNERFGRTD TSVTGQILKL MSANPDAILI AGSGTPAVLP QKTLGERGYK GRIYQTHGIA SWDFLRVGGK DVEGTLFPTG PVVVARQLPD SHPVKKVALD FVTRYEAKYG PDTVTQFAGD AWGAWLLLDD ASRRALKSGA QPGTPAFRAA LRDAIESTHN LTVPNGVLNL SAQDHQGFDQ RARVMGVVRN GKFAYAGDK
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