Gene Rmet_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2820 
Symbol 
ID4039647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3067829 
End bp3068998 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content66% 
IMG OID637978219 
Productextracellular ligand-binding receptor 
Protein accessionYP_584962 
Protein GI94311752 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC GCAAGCTGCT GCTGCCAGTG ATGTCCATGT TGTCTTTTGG TGTCGCCACG 
GGGTCGGCCC ATGCCGATAT CCGCGTCGGC GTCGACCTGT CGACCACAGG CCCCGCCGCC
GCGATCGGCA TCCCGTCGCG CAACACGGTG CAGATGTGGC CGCAGACGCT TGGCGGCCAG
CGCGCGCAGT ACATCGTGCT CGACGACGCC ACTGACCCGG CTGCTGCCGT GCGCAACGTG
CGCAAGCTCA TCGCCGAGGA CAAGGTCGAT GTGATCGTCG GCCCCAACAT CACGCCAAAC
GCGATTGCCG CGCTCGACGC CATTGCCGAG AGCGGGACGC CGATGGTGGC GCTGGCCGCC
TCGGCTTCAA TCATCGAGCC GGCCGGCGAC GCACGGCGCC GCTGGGCATT CAAGATGCCG
CAGAACGACG CCCTGATGGC GACGATCCTG ACCGAGCACA TGACCAACCA GGGCGTGAAG
ACGGTGGGCT TCATCGGCTT CAACGATGCC TACGGCGAAA GTTGGTGGCG CGAGTTTTCG
AAGATGGCCG AGATCCGTCG CCTGCGCGTG GTGGGCAACG AGCGCTTCGG GCGCACCGAT
ACGTCGGTGA CCGGGCAGAT ACTGAAGCTG ATGTCGGCGA ATCCGGATGC CATCCTGATT
GCGGGCTCGG GCACGCCGGC AGTGCTGCCT CAGAAGACAC TCGGCGAGCG CGGCTACAAG
GGCCGCATCT ACCAGACCCA CGGCATTGCG TCGTGGGACT TCCTGCGCGT GGGTGGCAAG
GACGTCGAGG GCACACTCTT TCCGACCGGG CCAGTGGTGG TAGCGCGGCA GTTGCCCGAT
AGCCATCCGG TGAAGAAGGT GGCGCTCGAT TTCGTCACGC GCTATGAAGC GAAGTACGGC
CCGGATACGG TGACGCAGTT TGCTGGCGAT GCATGGGGCG CATGGCTGCT GCTCGACGAT
GCCAGCCGAC GCGCGCTCAA GAGCGGCGCG CAGCCAGGCA CGCCAGCGTT CCGCGCCGCG
CTGCGTGACG CGATCGAATC GACGCACAAC CTGACCGTGC CCAATGGCGT GCTCAACCTG
AGCGCGCAGG ATCATCAAGG TTTCGACCAG CGTGCCCGCG TGATGGGCGT GGTGCGCAAT
GGCAAGTTCG CCTACGCAGG CGACAAGTAA
 
Protein sequence
MRLRKLLLPV MSMLSFGVAT GSAHADIRVG VDLSTTGPAA AIGIPSRNTV QMWPQTLGGQ 
RAQYIVLDDA TDPAAAVRNV RKLIAEDKVD VIVGPNITPN AIAALDAIAE SGTPMVALAA
SASIIEPAGD ARRRWAFKMP QNDALMATIL TEHMTNQGVK TVGFIGFNDA YGESWWREFS
KMAEIRRLRV VGNERFGRTD TSVTGQILKL MSANPDAILI AGSGTPAVLP QKTLGERGYK
GRIYQTHGIA SWDFLRVGGK DVEGTLFPTG PVVVARQLPD SHPVKKVALD FVTRYEAKYG
PDTVTQFAGD AWGAWLLLDD ASRRALKSGA QPGTPAFRAA LRDAIESTHN LTVPNGVLNL
SAQDHQGFDQ RARVMGVVRN GKFAYAGDK