| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2816 |
|---|
| Symbol | |
|---|
| ID | 4039643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3062895 |
|---|
| End bp | 3064577 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637978215 |
|---|
| Product | sulfite reductase (NADPH) subunit beta |
|---|
| Protein accession | YP_584958 |
|---|
| Protein GI | 94311748 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.377883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAGT ACGATCAATA TGACCAGCGT ATCGTCCAGG AGCGCGTTGC CCAGTTCCGT
GACCAGGTGC GTCGCCGCCT GTCCGATGAG CTGACCGAGG AAGAATTCCT GCCGCTGCGC
CTGCAGAACG GCCTGTACAT GCAGCGTCAC GCCTACATGC TGCGCGTGGC GATTCCGTAC
GGCCTGCTGG CCTCGAAGCA GATGCGCATG CTGGCCCATA TCGCCCGCAC CTACGACCGC
GACTACGGCC ATTTCTCCAC GCGCCAGAAC ATCCAGTACA ACTGGATGGA TCTGGAGCGC
GTGCCCGACG TGCTGGACGA CCTCGCCAGC GTCGAAATGC ACGGCATCCA GACCTCCGGC
AACTGCGTGC GCAACATCAC CACCGACCAG TTCGCCGGCG TGGCGCCGGA CGAGACGGTG
GACCCGCGCG TGCTGGCCGA ACTGCTGCGC CAGTGGAGCA CGTTCCAGCC CGAATTCGCG
TTCCTGCCGC GCAAGTTCAA GATCGCCATC TCGTCGTCGG CCGATGACCG CGCCGTGGTG
CAGATGCACG ATATCGGCAT CTATGCGTAC AAGAACGCCG CTGGCGAGAC GCGCCTGCGC
ATCCTTGCTG GTGGAGGTCT GGGCCGCACG CCGATTCTGG GCACGATCAT CAAGGAAGAT
CTGCCGTGGC AGCACATGCT GACCTATGTG GAGTCCGCGA TCCGCGTGTA CAACCGCTAC
GGCCGCCGCG ACAACAAGTA CAAGGCCCGC ATCAAGATCT TGGTGAAGGC CATCGGCGCC
GAGAAGTTCG CCGCCGAAGT GGAAGAAGAG TGGAAGTTCA GCAAGGACGG CCCGGGCACG
CTGACGCAGG CCGAGTTCGA TCGCGTGGCG CAGTACTTCC AGCCGCCCGC CTACGAAAAG
CTGCCCGACA CCGACGCATC GTTCGAAAAG CACCTGCTCG AGAACAAGGC GTTCGCACGC
TGGGTCAACC GCAACGTGCA CGCGCACAAG GTGCCGGGCT ATGCATCCGT GACGCTGTCG
ACCAAGCCGG GTCCGGTGTC GCCCCCGGGC GATGCCACGT CCGCGCAAAT GGACACGGTT
GCCGATTTCG CTGATCGCTA TGGCTATGGC GAACTGCGCG TGGCGCATGA GCAGAACCTG
GTGCTGCCCG ATGTGAAAAA GCGTGACCTG TTCGCGCTGT GGGAAGACGC GAAGAAGGCC
GGTCTGGCCA CGGCCAACAT CGGCCTGCTG ACCGACATCA TCGCTTGCCC GGGCGGCGAC
TTCTGCTCGC TGGCCAACGC CAAGTCGATT CCGATCGCGC TGGCGATCCA GGAGCGCTTC
GACAACCTCG ACTACGTCTA CGACCTCGGC GACATCTCGC TGAACATCTC GGGTTGCATC
AACGCCTGCG GCCACCACCA CGTCGGCAAC ATCGGCGTGC TGGGCGTCGA CAAGGATGGC
GCCGAGTGGT ACCAGGTCAC GATCGGCGGC GCCCAGGGCA ATGACACGGC GCTGGGCAAG
GTGATCGGCC CGTCGTTCAG CGCCCACGAG ATGCCCGATG TGGTGTCGCG CATCATCGAG
ACATTCGTGG CCAACCGTGT TGGCGACGAG CGCTTTATCG AAACCGTTGG CCGGATTGGC
ATCGCGCCGT TCAAGGAACG GGTGTACGCG GACAAGCAGC GCGAAGAGCG CGCCGAAGCC
TGA
|
|---|
| Protein sequence | MYQYDQYDQR IVQERVAQFR DQVRRRLSDE LTEEEFLPLR LQNGLYMQRH AYMLRVAIPY
GLLASKQMRM LAHIARTYDR DYGHFSTRQN IQYNWMDLER VPDVLDDLAS VEMHGIQTSG
NCVRNITTDQ FAGVAPDETV DPRVLAELLR QWSTFQPEFA FLPRKFKIAI SSSADDRAVV
QMHDIGIYAY KNAAGETRLR ILAGGGLGRT PILGTIIKED LPWQHMLTYV ESAIRVYNRY
GRRDNKYKAR IKILVKAIGA EKFAAEVEEE WKFSKDGPGT LTQAEFDRVA QYFQPPAYEK
LPDTDASFEK HLLENKAFAR WVNRNVHAHK VPGYASVTLS TKPGPVSPPG DATSAQMDTV
ADFADRYGYG ELRVAHEQNL VLPDVKKRDL FALWEDAKKA GLATANIGLL TDIIACPGGD
FCSLANAKSI PIALAIQERF DNLDYVYDLG DISLNISGCI NACGHHHVGN IGVLGVDKDG
AEWYQVTIGG AQGNDTALGK VIGPSFSAHE MPDVVSRIIE TFVANRVGDE RFIETVGRIG
IAPFKERVYA DKQREERAEA
|
|---|
| |