| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2804 |
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| Symbol | |
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| ID | 4039631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3051158 |
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| End bp | 3052831 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978203 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_584946 |
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| Protein GI | 94311736 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.416197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.582651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTACA ACAAACGTTC CCAGCACATC ACGCAAGGCG TGGCGCGCTC CCCCAACCGT
TCGATGTACT ACGCGCTCGG CTACAAGAAG GAAGACTTCG ACAAGCCGAT GGTGGGTATC
GCCAACGGCC ACTCGACGAT CACCCCCTGC AACGCCGGCC TGCAGCGCCT GGCGGACGCG
GCCGTGGATG CGATCAAGGC CTCGGACGCC AACCCGCAGA TCTTCGGCAC GCCGACGATC
TCCGACGGCA TGTCGATGGG CACCGAGGGC ATGAAGTACT CGCTGATCTC GCGTGAAGTC
ATTGCCGACT GCATCGAAAC CGCTGCCCAG GGCCAGTGGA TGGACGGCGT GGTCGTGATC
GGCGGCTGCG ACAAGAACAT GCCCGGCGGC ATGATCGCAC TGGCGCGCAC CAACGTGCCG
GGCATCTACG TCTACGGCGG CACCATCCGC CCGGGTAACT GGAAGGGCAA GGACCTGACC
ATCGTGTCGT CGTTCGAGGC CGTGGGCGAA TTCACCGCCG GCCGCATGAG CGAGGAAGAC
TTCGAGGGCG TGGAGAAGAA CGCCTGCCCG AGCACCGGCT CGTGCGGTGG CATGTACACC
GCCAACACAA TGAGCTCGTC GTTCGAGGCG CTGGGCATGT CGCTGCTGAA TTCGTCGACG
ATGGCCAACC CGGACCAGGA AAAGGTGGAC AGCGCCGCCG AATCGGCCCG CGTGCTGGTG
GAAGCCATCA AGAAGGACAT CAAGCCGCGC GACATCATCA CGCGCAAATC GATCGAGAAC
GCCGTGACGC TGATCATGGC CACGGGCGGT TCCACCAACG CGGTACTGCA TTACCTGGCC
ATCGCCCACT CGGCCGAAGT GGAATGGACC ATCGACGATT TCGAGCGCAT CCGCCGCCGC
GTGCCGGTGA TCTGCAACCT GAAGCCGTCG GGCGCCTACG TGGCCACCGA CCTGCACCGC
GCCGGTGGCA TTCCGCAAGT GATGAAGATC CTGCTGAACG CCGGTCTGCT GCATGGCGAC
TGCCTGACGA TCACGGGCCG CACGCTGGCC GAGGAGCTCG AGCACGTTCC CAATGAGCCG
CGTACCGACC AGGACGTGAT CCTGCCGATC TCGCAGGCCC TGTACAAGCA AGGCCACCTG
GCCATCCTGA AGGGCAACCT CGCCGAGGAA GGCGCAGTGG CCAAAATCAC CGGCCTGAAG
AACCCGGTCA TCACCGGCCC GGCCCGCGTG TTCGAGGACG AACAGAGCGC CATGGAAGCG
ATCCTGGCGG ACAAGATCAA CGCTGGCGAC ATCCTGGTGC TGCGCTACCT TGGCCCGAAG
GGCGGCCCGG GCATGCCTGA AATGCTGGCG CCGACTTCGG CGATCATCGG CAAGGGTCTC
GGCGAATCGG TTGGTTTCAT CACCGACGGC CGCTTCTCGG GGGGCACCTG GGGCATGGTG
GTTGGCCACG TTGCGCCGGA AGCCCATGTG GGCGGTACGA TTGCACTGGT TCAGGAAGGC
GACTCGATCA CGATCGACGC GCACCAGCTG CTGCTGCAAC TGAATGTGGC CGACGACGAG
CTGGCCCGCC GCCGCGCTGC CTGGAAACAG CCGGCGCCGC GCTACACGCG CGGCGTACTG
GCGAAGTTCG CGAGGCTGGC CTCCACGGCC AGCAAGGGCG CCGTGACGGA CTGA
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| Protein sequence | MAYNKRSQHI TQGVARSPNR SMYYALGYKK EDFDKPMVGI ANGHSTITPC NAGLQRLADA
AVDAIKASDA NPQIFGTPTI SDGMSMGTEG MKYSLISREV IADCIETAAQ GQWMDGVVVI
GGCDKNMPGG MIALARTNVP GIYVYGGTIR PGNWKGKDLT IVSSFEAVGE FTAGRMSEED
FEGVEKNACP STGSCGGMYT ANTMSSSFEA LGMSLLNSST MANPDQEKVD SAAESARVLV
EAIKKDIKPR DIITRKSIEN AVTLIMATGG STNAVLHYLA IAHSAEVEWT IDDFERIRRR
VPVICNLKPS GAYVATDLHR AGGIPQVMKI LLNAGLLHGD CLTITGRTLA EELEHVPNEP
RTDQDVILPI SQALYKQGHL AILKGNLAEE GAVAKITGLK NPVITGPARV FEDEQSAMEA
ILADKINAGD ILVLRYLGPK GGPGMPEMLA PTSAIIGKGL GESVGFITDG RFSGGTWGMV
VGHVAPEAHV GGTIALVQEG DSITIDAHQL LLQLNVADDE LARRRAAWKQ PAPRYTRGVL
AKFARLASTA SKGAVTD
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