Gene Rmet_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2800 
Symbol 
ID4039627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3047013 
End bp3048083 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content62% 
IMG OID637978199 
Producthypothetical protein 
Protein accessionYP_584942 
Protein GI94311732 
COG category[S] Function unknown 
COG ID[COG4269] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.168464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA ATTTTCAGGG AAGCCACTAC ATCGGCGACG GAACGCAGGC CGCGCCGCGC 
AATCTGCCCC TGTCGTTCAC TGGCTCGGGG TCCGAGTACT TCCGCATCTG GATCGTCAAC
GCATTGCTGT CGATCATCAC GCTGGGTATC TACTCCGCAT GGGCGAAGGT CCGCACGCTG
CAGTACTTCT ATCGCAATAC GCAGCTCGAT GGCGCCACGT TCGACTACCA CGGCAGTCCA
ACCGCGATTC TCAAGGGCCG CGCGATCGTT TTCGTCCTGG CCCTGGCGTA CAACCTGGCC
AGTCATGCAT CGCCACTCCT GGCTGTCGGG CTTGCCGTCG TGCTGGCTGC CGTGTTTCCG
TTTCTGCTGG TTCGCTCGCT GCGATTCCGC ATGGCGAATT CGAGCTACCG CGGTCTGCGT
TTCGCCTTCA TCGGCAAGGA TGCCGAGGGT TATCAGGTCT TTCTGCTCTG GCCGATCCTG
ACAGTGTTGT CGCTCTATCT GCTGGCGCCG TTCGCGCACC AACGTTTCAA GCGCTACCAG
CACAACCACA CGCTGTTCGG CACGGCGCCA TTCGCATTCG ACGCCACGGC CAGCGCCTTC
TACGGTGTCT ACCTGCGCAC CGCAGGCATG GTCGCGATCT TCCTGATCGG CGGCGGTCTG
GTGGGCGGCT CGCTGGCCAG CGCGGTTGGG CAATCGAAAG GGGCGGTCGG CGTCGTATTT
GGCATGATGA TGATCGGCCT GTACTTCGGC CTGATGATGA TCGGCCCCTA TTTCACGGCT
CGGCTGCAGA ACCTGGTGTG GAACAACACC ACCCTGCTGC CGCACCGCTT TCGCAGTGAC
GTGCGTGCCG GCAAGCTGTT CTTCATCGTG CTGACCAACT TCATCTTCAT TGCACTGACG
CTGGGCCTGT TCTATCCATT CGCGCGCGTG CGCTCGACGC GCTATCGCGT GGAAGCGATG
ACGATGATCG CGGTCGGGCC GCTCGACGAG TTCGTGGCTG GCGAGCAGCA GCACGTTGGC
GCGCTCGGTG ATGCCGCGGT CGACTGGTAC GACATCGACA TCGCGCTCTG A
 
Protein sequence
MEDNFQGSHY IGDGTQAAPR NLPLSFTGSG SEYFRIWIVN ALLSIITLGI YSAWAKVRTL 
QYFYRNTQLD GATFDYHGSP TAILKGRAIV FVLALAYNLA SHASPLLAVG LAVVLAAVFP
FLLVRSLRFR MANSSYRGLR FAFIGKDAEG YQVFLLWPIL TVLSLYLLAP FAHQRFKRYQ
HNHTLFGTAP FAFDATASAF YGVYLRTAGM VAIFLIGGGL VGGSLASAVG QSKGAVGVVF
GMMMIGLYFG LMMIGPYFTA RLQNLVWNNT TLLPHRFRSD VRAGKLFFIV LTNFIFIALT
LGLFYPFARV RSTRYRVEAM TMIAVGPLDE FVAGEQQHVG ALGDAAVDWY DIDIAL