| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2780 |
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| Symbol | cobD |
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| ID | 4039606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3027370 |
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| End bp | 3028350 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637978179 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_584922 |
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| Protein GI | 94311712 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0845124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.636847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATGC TGTCCTGGCC GGCCTGCGTG GCGGCTGCGA TCGCCGGCGT TCTGCTGGAT
CGCTGGCTGG GCGAGCCGCG CCGCTGGCAT CCGCTGGTCG GCTTTGGCCG CTTGGCCACG
GCCGTCGCCA ATCGCCTCAA TCGTCCCGAA CGTGGCGCGC TACGCCAGCG CGTGGCGGGC
CTGATTGCGT GGGCGGTGGT CGTGCTCGTG CCGGCCGCCA TCGCGGTGTG GCTGATCTCG
CTGGCGCAGG CCGTGCATCC CGCGCTGGCC TGGGTGCTCC ATGCAGTGGC GCTCTATGCG
GCGCTTGGCG CCCGCAGCCT CTCTCAACAC ATCGCTCCGA TCGCCGGCGC CCTGACACGC
GGCGACCTGT ACGCCGCGCG CCGGCTTACC GCATGCATCG TCTCGCGTGA CACCGAGGAT
GCCGACGCCG AGGCGCTGGC CCGCGCCGCG TGCGAATCGG CGCTGGAGAA CGGCAACGAT
GCGATCTTCG GCGCGCTGTT CTGGTTCCTG ATCGGCGGCG CGCCGGCCGT GATCGTGTTC
CGTCTGGCCA ATACGCTGGA CGCGATGTGG GGCTATCGCA CGCCACGCTG GCTGATGTTC
GGCTGGGCGG CGGCACGCAT CGACGACGTA CTCAATTTCG TTCCGGCGCG ACTGACCGCG
CTCTCCTATG CATCGCTCGG CGCAACGGCG CAGGCGCTGC GCTGCTGGCG CACCCAGGCA
CGCGCGTGGT CGAGCCCCAA TGCCGGTCCG GTGATGGCGG CCGGCGCGGG CGCCGTGGGC
GTGGCTTTGG GCGGCGGCGC GCGCTATCAC GGCGAGTGGG AAGAGCGACC GCCGCTCGGC
GCCGGTGACG CGCCCGCGGC CATCCACATC CGCGCCTGTC TTCGGCTGGT GCAGCGCGCG
GTGTGGCTGT GGCTCGGTCT GGCGATGCTG AGCGTGCCGC TGGTCGACCT GCTCGCCGGA
CTGCTGGAGC GCACGCCATG A
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| Protein sequence | MIMLSWPACV AAAIAGVLLD RWLGEPRRWH PLVGFGRLAT AVANRLNRPE RGALRQRVAG
LIAWAVVVLV PAAIAVWLIS LAQAVHPALA WVLHAVALYA ALGARSLSQH IAPIAGALTR
GDLYAARRLT ACIVSRDTED ADAEALARAA CESALENGND AIFGALFWFL IGGAPAVIVF
RLANTLDAMW GYRTPRWLMF GWAAARIDDV LNFVPARLTA LSYASLGATA QALRCWRTQA
RAWSSPNAGP VMAAGAGAVG VALGGGARYH GEWEERPPLG AGDAPAAIHI RACLRLVQRA
VWLWLGLAML SVPLVDLLAG LLERTP
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