Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2768 |
Symbol | |
ID | 4039594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3009933 |
End bp | 3010817 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637978167 |
Product | OmpA/MotB |
Protein accession | YP_584910 |
Protein GI | 94311700 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.961309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCGAGTG CGGAATTACA GACAATTACA TCTCTCACAG TCTCGGGCTT GTGCACGCGC CGCCATATGC CTATTGTAGT GCGCCAATCT TGGGATCCCG CGTGCCGACA GGCGGTATGC GGGATCGTCC TGAGTGTTTT TGATTGCATC ATGAAAGTTG TACTGCCAGT GGGCGGCATT ACGCGCCAGG CGTTAACATG CAGGATGGCT TTGGCAAAAC ATTTACGGGA ATCACCAGAA GGAGAAAGCA TGAATTTCAA GCTCGTCACC GTCTCGCTCG TCGCGGCTGC GGCCCTGGCG GGTTGCGCCA CCGAACAACA GACCAATACG GCGGTCGGCA CCGGAGTCGG TGCGGCGGTA GGCGCGGGGA TCGGTAACCT GATCGGCGGC AACACCACTG GCACGCTGGT CGGCGCGGCA GTGGGCGGCG CGCTCGGCGG CGCCACCGGT TACAACTGGA ATGCTATCCG CGGCAAGCTG AACAAGGACA CCGCGGGCAC CGGCACCCAG ATCACCGAGC AGCCGGACGG CTCCCTGAAG GTCAACATCC CGAGCCAGGT CACGTTCGAC ACGGACAGCT CGACGATCAA GCCGTCGTTC CGCAACGTGC TCGACCAGGT GGCCCAGACG CTAGCGCAGC ATCAGGACGT GTCGGCCAAC GTCGTTGGCC ATACGGACAG CACCGGCAAC CCGCAATACA ACATGCAGCT CTCGCAACGC CGCGCCCAGA GCGTGGCTGG CTACCTGGGT GACCGTGGCG TCGCCCGGAC CCGCCTGAGC GCCGAAGGCC GGGGCCAAAC CCAGCCCGTC GCGGACAATT CGACCGAGGC TGGCCGTGCC CAAAATCGTC GCGTCGAAAT TTTCTTGAAA CCAATTTCTG GGTGA
|
Protein sequence | MPSAELQTIT SLTVSGLCTR RHMPIVVRQS WDPACRQAVC GIVLSVFDCI MKVVLPVGGI TRQALTCRMA LAKHLRESPE GESMNFKLVT VSLVAAAALA GCATEQQTNT AVGTGVGAAV GAGIGNLIGG NTTGTLVGAA VGGALGGATG YNWNAIRGKL NKDTAGTGTQ ITEQPDGSLK VNIPSQVTFD TDSSTIKPSF RNVLDQVAQT LAQHQDVSAN VVGHTDSTGN PQYNMQLSQR RAQSVAGYLG DRGVARTRLS AEGRGQTQPV ADNSTEAGRA QNRRVEIFLK PISG
|
| |