| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2756 |
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| Symbol | |
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| ID | 4039582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2997368 |
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| End bp | 2998204 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978155 |
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| Product | formate dehydrogenase subunit FdhD |
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| Protein accession | YP_584898 |
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| Protein GI | 94311688 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000145311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTGC GCCCCGAACT GACCCATGCC AGCGTACCCC TGATCGAAGA GGTGGCTGTC
CTCGACGAGC AAGGCAGGGA ACGTCCGGCC TGGCTGCCAG GCGAGCGCCC GCTGACGGTC
TATCTGGACA AACGCGAACT GGTCACGCTG ATGACGCTGG GCGGCGCGCC GGAGCATCTC
GTCCTGGGTT ATCTGCGCAA TCAGCGACTG GTGGAGTCGA TCGAGCAGAT TGCTTCGGTC
CAGGTGGACT GGGAAACCGA GTCGGTGGCA GTGACCACCC GTTCGGGGGT CGATCGCATC
GAGGAGCGCA CCGCGCGCCG CGTGGTGACC ACGGGCTGTG GGCAGGGCAC GGTGTTCGGT
TCGCTGATGG ACGAGGTCGA CACCATCGCG CTGCCCCCGG ACGCCCGGCT CGACCAGGAA
ACGCTGTACG CGATCGTCGA TACCATCCGG CTTCAGCAAT CGGTCTACAA GCAGGCCGGC
TCGGTTCACG GCTGCGCCTT GTTCCGGGGC AGCGAGTTGC TGACCTTCGT CGAGGACGTG
GGCCGCCACA ACGCCGTGGA TGCCATCGCC GGGTGGATGT GGCTCGAGGA CATGAGCGGC
GCCGACAAGA TTTTCTACAC CACGGGCCGA CTGACGTCGG AAATGGTCAT CAAGGGCGCC
CAGATGGGCA TTCCGTTCCT GTTATCGCGT TCGGGTGTGA CGCAAATGGG TTACCAGATG
GCCAAGCGTG TCGGAATGAC GCTATTCGCG CGCTGCACCG GCAAGCATTT CCTGCTCTAC
ACAGGGCGGG AGCGGTTCCG CCACACACCG ACCGAAGCGC TGGTACCGGC GGTCTAG
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| Protein sequence | MSLRPELTHA SVPLIEEVAV LDEQGRERPA WLPGERPLTV YLDKRELVTL MTLGGAPEHL
VLGYLRNQRL VESIEQIASV QVDWETESVA VTTRSGVDRI EERTARRVVT TGCGQGTVFG
SLMDEVDTIA LPPDARLDQE TLYAIVDTIR LQQSVYKQAG SVHGCALFRG SELLTFVEDV
GRHNAVDAIA GWMWLEDMSG ADKIFYTTGR LTSEMVIKGA QMGIPFLLSR SGVTQMGYQM
AKRVGMTLFA RCTGKHFLLY TGRERFRHTP TEALVPAV
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