| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2753 |
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| Symbol | |
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| ID | 4039579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2992394 |
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| End bp | 2994118 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978152 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_584895 |
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| Protein GI | 94311685 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.354822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCAT TGGAATATAT GCCGCCGCTC ATGTTCGGCG GCTTGGTGGT ATTTATGCTG
ATCGGGTTCC CGGTCGCATT CTCGCTGTCG GCCGTGGGTC TGGCCTTCGG CTTCCTGGCC
ATCGAATGGG GCTACTTCCC CGTGCAGTTC CTGCAGGCCG TGCCAAGCCG CGTGTTCGGC
AGCGTGCTGT CCAACGAACT GCTGCTGGCG ATTCCGTTCT TCACCTTCAT GGGCGCGATC
CTGGAGAAAT GCGGACTCGC GGAGGACATG CTCGACTCGA TGGGCCAGTT GTTCGGCCCG
GTTCGTGGCG GCCTGGGCTA CTCGGTCATC ATCGTCGGCT TCATCCTGGG CGCGATCACC
GGCACGGTGG CGGCGCAGGT GATCGCCATG GCCATGATCT CGCTGCCCGT GATGATGCGC
TACCGCTACA ACATGAAGTA CGCCACGGGC GTGCTGGCCG CATCGGGCAC GATCACCCAG
CTGGTGCCGC CGTCGCTGGT GCTGGTGGTG CTGGCCGACC AGTTGAAGAC CCCGGCCGGT
AGCGCCGACG TCGGCAGCAT GTACCTGGGC GCGTGGGGCC CGTCGGTGAT CCAGATCGCG
CTGTTCGCGC TCTACACCTT CGTGCTGACC CGCATCAAAC CAGACTGGCT GCCGCCGGTG
CCGGAAGAAG CGCGCACGCT GCGCGGCTGG GCGCTGTGGC GTACCTGCCT GCGCGGCATC
ATCCCCTGCG CCGTGCTGAT CTTCCTGGTG CTCGGCACGA TCATGCTCGG CATCGCCACG
CCGACCGAGT CCGGAGCGAT GGGCGCGGTT GGCGCGCTGG TGCTGGCCGT GATCCGCGAC
AAGGGCTTCA ACAAGATCGA CCGCAACATC TATCGGCTGG GCCTGTTGGC AACGCTGGTG
GCCGCTGCGG TGGGCGTCTT CGCATTCGGC TCGCATGCGT TCCGCATCCC GCTGGCGATT
GCCTACCTTG TGGTGTTGTG GCTCCTGATC CGCGCCGGCC AGCTTACCGA CCTGCGGCTG
CTGATCGTGG ATGCCTACCA ATCCACCGCG CGCATCACCG CCATGGTCGT GTTCATCCTG
ATTGGATCCA CCTGCTTCTC GGTGGTGTTC CAGGGCGTGG ACGGCGGCGC ATGGGTGGAA
CACCTGTTCA CCTCGCTACC GGGCGGCTGG ATCGGCTTCC TGATCGTGGT GAACCTGTTC
ATCTTCTTCC TGGCGTTCTT CCTCGACTTC TTCGAGATCG CGTTCATCGT CGTGCCGATG
CTGGCGCCGG TTGCGGTCAA GGTGCTGGCC CCGGTGGTAG CCGATTCGAT GGGCGGCAAC
CCCGAAGCCG CCGCCACGGC CGCGCTGGTC TGGTTCGGCG TGATGCTGTG CGTGAACATG
CAGACGTCGT TCATGCACCC GCCGTTCGGC TTCGCGCTGT TCTACCTGCG CGGCATCGCC
CCGAAGGAAG TCAAGAGCTC GGACATCTAC TGGGGTGCCC TGCCGTGGGT GGGCCTGCAG
CTCGTCATGG TGCTGCTGGT GATGTTCTGG CCGGGCATGG TGACTGGCCT GCTCGACAAG
GGATCGCTCA AACACAGTAA TTCCGCCGAG GTCAGTATCC CGCTTGGCGG ACAGGACGAT
GGCAAGCCCG GGGGGGCGTC CTCGCCCGGC ACGCTGGAGT TGCCGAGCGG CGGCGACTCG
AGTGAACCGG TGGCGCCTTC GTTCCAGTTC GAGAAAAGCA AGTAG
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| Protein sequence | MIPLEYMPPL MFGGLVVFML IGFPVAFSLS AVGLAFGFLA IEWGYFPVQF LQAVPSRVFG
SVLSNELLLA IPFFTFMGAI LEKCGLAEDM LDSMGQLFGP VRGGLGYSVI IVGFILGAIT
GTVAAQVIAM AMISLPVMMR YRYNMKYATG VLAASGTITQ LVPPSLVLVV LADQLKTPAG
SADVGSMYLG AWGPSVIQIA LFALYTFVLT RIKPDWLPPV PEEARTLRGW ALWRTCLRGI
IPCAVLIFLV LGTIMLGIAT PTESGAMGAV GALVLAVIRD KGFNKIDRNI YRLGLLATLV
AAAVGVFAFG SHAFRIPLAI AYLVVLWLLI RAGQLTDLRL LIVDAYQSTA RITAMVVFIL
IGSTCFSVVF QGVDGGAWVE HLFTSLPGGW IGFLIVVNLF IFFLAFFLDF FEIAFIVVPM
LAPVAVKVLA PVVADSMGGN PEAAATAALV WFGVMLCVNM QTSFMHPPFG FALFYLRGIA
PKEVKSSDIY WGALPWVGLQ LVMVLLVMFW PGMVTGLLDK GSLKHSNSAE VSIPLGGQDD
GKPGGASSPG TLELPSGGDS SEPVAPSFQF EKSK
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