Gene Rmet_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2724 
Symbol 
ID4039550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2959844 
End bp2961019 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content59% 
IMG OID637978123 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_584866 
Protein GI94311656 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACA CTTCATTTTC TCCGTGGCCT AGTTTCACCA AGGAAGAGGC GGACGCAGTC 
CAGCAGGTGT TGCTCTCTAA TAAGGTGAAC TATTGGACCG GCACGGAATG TCGCGAGTTC
GAGAAAGAGT TTGCCGCATG GACGGGTACA CGCCACGCCA TCGCGCTCAG TAATGGCACA
TTGGCTTTGG ACTTGGCGCT AAAGGGGCTT GGAATCGGGC CTGGCGATGA AGTCATCGTC
ACACCGCGCA CGTTCATCGC CAGCGCGTCC TGCGTAGTCA ACGCTGGTGC GATTCCGGTT
TTCGCCGATG TCGATCCGGA AAGCGGAAAC CTTTCGGCGG AGACCATTGC GAGAGTCCTG
ACGCCGCGCA CCAAAGCAGT GATCTGCGTG CACCTTGCGG GGTGGCCATG CGACATGGAT
CCCATCATGG AGTTGGCGGC CCGCCATGGA TTGAAGGTCA TCGAGGATTG TGCACAGGCA
CACGGCGCTC GCTACAAGGG GCGTAGTGTC GGATCGATCG GACACGTCGG TGCATGGAGC
TTCTGCCAGG ACAAGATCAT GACCACGGGT GGTGAAGGTG GCATGGTGAC GCTCAATGAT
GAAGCGCTCT GGCGCGAGAT GTGGGCGTAC AAGGACCACG GCAAGAGCTT TGAGGCGGTG
TACGAGCGTG AGCACGCACC GGGGTTTCGC TGGTTGCATG AGACCTTCGG CACCAACTGG
CGAATGCTGG AGATGCAGGC CGTAATCGGA CGTATTCAAC TGCGCCGCAT GACGGAGTGG
ACCGCTCGAC GGACTGAACA CGCCGAGGCA ATTCATTCGG CCTGCAAACC ATTCTCTGCC
GTGCGTGTGC CTGTCGCTCC GGCGAGCAGC ACCCACGCGC AATACAAATG CTATGTGTAT
GTCCGACCTG ACCACTTGGC GGAAGGCTGG ACGCGTGACC GAATCATTCA GACGATTGTC
GATGCCGACG TGCCCTGTTA TCAGGGCTCT TGTTCCGAGG TCTACCTTGA AAAGGCGTTT
GACGATACTG GCTGGCGACC GGCCGAGCGG CTACCGATCG CACGCGCAAT GGGCGAGGAC
AGCCTGATGT TCCTTGTACA TCCCACCTTG ACCAAGGATG AGATTGCAAA GACATGCCGT
GTGCTGACTG ACGTCCTCGG GCGGGCCAGC CGGTGA
 
Protein sequence
MLNTSFSPWP SFTKEEADAV QQVLLSNKVN YWTGTECREF EKEFAAWTGT RHAIALSNGT 
LALDLALKGL GIGPGDEVIV TPRTFIASAS CVVNAGAIPV FADVDPESGN LSAETIARVL
TPRTKAVICV HLAGWPCDMD PIMELAARHG LKVIEDCAQA HGARYKGRSV GSIGHVGAWS
FCQDKIMTTG GEGGMVTLND EALWREMWAY KDHGKSFEAV YEREHAPGFR WLHETFGTNW
RMLEMQAVIG RIQLRRMTEW TARRTEHAEA IHSACKPFSA VRVPVAPASS THAQYKCYVY
VRPDHLAEGW TRDRIIQTIV DADVPCYQGS CSEVYLEKAF DDTGWRPAER LPIARAMGED
SLMFLVHPTL TKDEIAKTCR VLTDVLGRAS R