| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2723 |
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| Symbol | |
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| ID | 4039549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2957898 |
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| End bp | 2959847 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637978122 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_584865 |
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| Protein GI | 94311655 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAATC TTACGGTTCC GCTACTCGCG CTGCCCCGGT CGGCCAAGCG CGTGGTTGTC
GTTGCGCTGG ATTTGATCCT GGCGCTGGTA TCCGTCTGGG TGGCGTTCTA TCTGCGCATA
GACCAAACGG GACTGCCAAT CCTGCAGCAG GAGTACGTCT ATTTTCTCTC GCCTTTGCTG
GCCTTCCCGA TCTTCGTTCG AATGGGTTTG TACAGAGCGA TCTTTCGGTA CACAGGAATG
GCCGCGCTTG CTAGCACTGC GAAGGCCGTG GGTCTCTATG GCGTATTGTT CTTCAGTGCG
CTGCTTCTCT TGAAGCTCGA TGGTGTACCG CGCAGCATTG GCCTGATCCA GCCGATGCTG
TTCCTGTTGC TGGTTGGGGC GAGTCGTGCT CTGGCGCGCT TCTGGCTAGC GGGGACGGCG
GCGAAGGTGC GTGCGCACGA AGGACGGTTG TTGATCTATG GTGCCGGCGA CGCGGGCGTG
CAAACTGCTT CGGCGCTTGC CGTTACGCAT CAGTTTGTGC TGTTGGGGTT CATCGATGAT
GATCGGGCCA AGATCGGCCG TACGATCAAC GGGCTCGATA TCTTCGGTCC GGATGACGTG
CCTGAAGCTG TCGAGCGTAT GGGTGTCACC GACATCCTGC TTGCGATTCC ATCCATGGGC
CGCGCCCAGC GCAACGCCGT AATCGACAAG CTGCGCGCGC TGCCCGTGCA CGTTCGAACG
CTGCCTGGTA TGGTGGATCT GGCATCGGGC CGTGTGACGA TACGCGATCT GCAGGAACTC
GATATCGAGG ACTTGCTTGG CCGCGCACCG GTGCCACCCG ATGCGGCATT GTTGGCGAAG
AACCTTGCTG ACAAGACGGT GCTCGTGACC GGGGCAGGCG GCAGCATCGG CAGTGAACTA
TGTCGCCAGA TCATGCTGGA GCGGCCGCGT CGGCTGGTGC TGGTCGAACA CAACGAGTTT
GGGTTGTATT CGATTCACCA AGAGCTTGAG CGCTTGCGCG ACGAGCATCG CCTGCAAACC
GAGGTTGTTC CGCTACTGGC CAGTGTGGTC AATTTGAGGC GTTTGCGCGA GATCTGCGGG
CTGTATCGAC CTGCCACGGT TTATCACGCC GCCGCATACA AGCATGTGCC GTTGGTCGAG
TGCAACGCGG CGGAAGGGGT CATGAACAAC GTGTTCGGTA CGCTGAACAT GGCACGCGCC
GCTATGGAAA GCCAGGCTGA GTACTTCGTG CTGGTGTCCA CGGACAAGGC GGTTCGACCC
ACTAATGTAA TGGGTGCTTC CAAGCGCATG GCGGAGCTGG TGTTGCAGGC AATGGCAGCC
CGGCAATCGG TCGACTTTGG ACTGCTCGAT GTTGAGAGCG AGGAGGCTGT GCCGAATCGC
ACAGTTTTCG CGATGGTGCG ATTTGGCAAT GTGCTAGGCA GCAGCGGAAG CGTTGTCCCT
CTGTTCAGAC GTCAATTGCT GGAAGGCGGG CCGTTGACCG TGACCCACGA GAAGGTGACG
CGTTACTTCA TGACTATCCC GGAGGCTGCC CAACTGGTGC TGCAGGCTGG CGCCATGGCC
CATGGCGGCG AGGTGTTCGT TCTGGACATG GGCCAGCCTG TCAAGATCAT GGATCTGGCG
CGACGCATGG TTCAGCTTTC TGGCATGACG GTGTGCGACG ATCAGCATCC GGATGGCGAT
ATCGAGATCC GCGTGACAGG TCTGCGCCCC GGCGAGAAGC TCTATGAAGA ATTGCTGATC
GGCGATAACC CCGAAGGTAC GGCCCATGAG CGGATCATGA AGGCGCGAGA GGATTACGTG
CCGTGGCCGG AATTTGCGCC CGTGCTTGCA TCCATGCGTG TGGCGGCCGA GCAGAGCGAC
GAGAAGCAGA TCAAGGAAAT CCTGGGCCGT CAGGTCCACG GATATGGTCC GCAGGCAGAG
GGCAAGGCTG CGAACGCCTT GCTGGTGTAA
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| Protein sequence | MKNLTVPLLA LPRSAKRVVV VALDLILALV SVWVAFYLRI DQTGLPILQQ EYVYFLSPLL
AFPIFVRMGL YRAIFRYTGM AALASTAKAV GLYGVLFFSA LLLLKLDGVP RSIGLIQPML
FLLLVGASRA LARFWLAGTA AKVRAHEGRL LIYGAGDAGV QTASALAVTH QFVLLGFIDD
DRAKIGRTIN GLDIFGPDDV PEAVERMGVT DILLAIPSMG RAQRNAVIDK LRALPVHVRT
LPGMVDLASG RVTIRDLQEL DIEDLLGRAP VPPDAALLAK NLADKTVLVT GAGGSIGSEL
CRQIMLERPR RLVLVEHNEF GLYSIHQELE RLRDEHRLQT EVVPLLASVV NLRRLREICG
LYRPATVYHA AAYKHVPLVE CNAAEGVMNN VFGTLNMARA AMESQAEYFV LVSTDKAVRP
TNVMGASKRM AELVLQAMAA RQSVDFGLLD VESEEAVPNR TVFAMVRFGN VLGSSGSVVP
LFRRQLLEGG PLTVTHEKVT RYFMTIPEAA QLVLQAGAMA HGGEVFVLDM GQPVKIMDLA
RRMVQLSGMT VCDDQHPDGD IEIRVTGLRP GEKLYEELLI GDNPEGTAHE RIMKAREDYV
PWPEFAPVLA SMRVAAEQSD EKQIKEILGR QVHGYGPQAE GKAANALLV
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