Gene Rmet_2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2714 
Symbol 
ID4039540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2946890 
End bp2948164 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content68% 
IMG OID637978113 
Product3-deoxy-D-manno-octulosonic-acid transferase 
Protein accessionYP_584856 
Protein GI94311646 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1519] 3-deoxy-D-manno-octulosonic-acid transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTT TCGTCTATTC GTTGCTGTGG CTGCTGATCT TGCCACTGGC GTTGCTGCGG 
CTGGTCTGGC GTTCGCGCAA GGAGTCGGGC TACATCCAGC ATGTTGGCGA GCGGCTGGGG
CGCTATGGCG ATCTATCGGC CGCCGGCCCA TGGCTGTGGG TCCACGCGGT GTCCGTTGGA
GAAACGCGGG CGGCGCAACC GCTGATCGAC GCGCTGCTGG CGGCGTATCC GCGGCACCGG
CTGCTGCTGA CGCACATGAC GCCGACCGGT CGTCAGACTG GCGCGCAGCT CTACGGTGCC
AACCCACGCG TGCAGCAGTG CTACCTGCCG TATGACCTGC CCTGGCTGGT CCGACGCTTT
CTTGCCTACT TCCAGCCGGA TGCCGGCCTG ATCATGGAAA CGGAAGTCTG GCCGAACCTG
GTGCACGTCA CGCGTCGCAT GGGCGTGCCA CTGTTCCTGG TCAACGCTCG TCTGTCGCCG
CGCAGCTATC GGCGTACCGC GCGATTCGGC GGTGCCGCCG CAGCGCTGTA CAACGACTTC
ACGATGGTGC TGGCCCAGAC CGCTGGTGAC GCGGAACGCT ATCGCGCGTT GGGCGTGAAG
TCGGTGCAGG TCACGGGCAA CCTGAAGTTC GATATGCAAC CGCCCGAGGC CGGCGTGGCA
CGCGGACAGC TTCTGCGGCA GGCTTTCGGC AACCGGCATG TGCTGGCGGC AGCGAGCACG
CGCGAGGGCG AGGAGCCGTT GATCCTGGAG GCATTCTCGC GCTGGCCGGG CACGGATCGC
CCCGCATTGC TGCTGGTGCC GCGCCATCCG CAGCGCTTTG ACGAGGTGGC CGCGATGGCG
ACGCGCGCCG GCTTCAGCGT GCAGCGGCGC AGCGCGCTCG ATATTGAGCA ATTGTCGGCG
CCGATTACCG CCGACGTCGT GCTTGGTGAT TCGATGGGCG AGATGGCGAT GTACTACGCG
GCCTCGGACA TCGCGTATAT CGGCGGCAGC CTGATCCCGC TCGGCGGTCA GAACCTGATC
GAGGCCTGCG CCGTGGGCAC GCCGGTGCTG ATGGGGCCAC ACACGTTCAA CTTCGCGCAG
GCGACCGAGG ACGCCATTGC CGCGGGCGCG TGCCAGCGCG TGGCCGATGC GGACGAACTG
ATGGTTGCCG CTGCTGCCAT CCTCGGTGAC GCAACGCGGC TTGCGGACAT GCGCGAGCAC
GCGCTGACCT TCGCCGGCCT CCATCGTGGC GCGACGGCAC GCACGCTGGG CGCGCTGGCG
CCGGTGTTGC GCTGA
 
Protein sequence
MLRFVYSLLW LLILPLALLR LVWRSRKESG YIQHVGERLG RYGDLSAAGP WLWVHAVSVG 
ETRAAQPLID ALLAAYPRHR LLLTHMTPTG RQTGAQLYGA NPRVQQCYLP YDLPWLVRRF
LAYFQPDAGL IMETEVWPNL VHVTRRMGVP LFLVNARLSP RSYRRTARFG GAAAALYNDF
TMVLAQTAGD AERYRALGVK SVQVTGNLKF DMQPPEAGVA RGQLLRQAFG NRHVLAAAST
REGEEPLILE AFSRWPGTDR PALLLVPRHP QRFDEVAAMA TRAGFSVQRR SALDIEQLSA
PITADVVLGD SMGEMAMYYA ASDIAYIGGS LIPLGGQNLI EACAVGTPVL MGPHTFNFAQ
ATEDAIAAGA CQRVADADEL MVAAAAILGD ATRLADMREH ALTFAGLHRG ATARTLGALA
PVLR