| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2701 |
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| Symbol | |
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| ID | 4039526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2934351 |
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| End bp | 2935583 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978099 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_584843 |
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| Protein GI | 94311633 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.986005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.471986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTACC AGACCTATCA GCTCTACGCG GATATGATGC AGCCGGCCTG CTCGCTGGCC
GACATCGCCT CCACGCTCAT CTCCGGATAC CGTCGCGCCG ACAACAGCGA GACGCTGCGC
GCGCTACGCG CCTGGTGCGA AGTGCTGGCG CTGGCACGTC TGACTCACTA CCGCCCTCCT
TTCGGCATCG ACCGCGTGCG TATCAATGGT CGCGGCGAGT ATGTGCCCGT GACCGAAGAA
ATCGTCATAC GTACGCCGTT CTGCACATTG CTGCGTTTTC GCCGCGAGGG CGCGCCCCAG
CAACCGCGTG TGCTGCTGGT GGCGCCGATG TCCGGCCACT TTGCCACGCT GCTGCGCGGT
ACCGTGGAAA CGATGCTCCG CGACCATGAC GTCTACATTA CCGACTGGCA TAACCCCCGT
GACATCCCGC TCGTCTGTGG CCGATTCGGC TTCGACGAAT TCGTGCATCA CCTGATCACG
TTCCTCCACG TATTGGGTGG CAACACGCAT GTCGTGGCCG TGTGCCAGCC GACCGTGGCC
GCGCTGGCGG CCGCCGCGCT GATGGCCGAG GACGGCGACC CGGCGCAGCC GCCGAGCCTG
ACGTTGATGG CGGGCCCGAT CGATGCGCGC GTAAATCCCA CCCGCGTCAA CGCGCTGGCT
ACCAGCCGCC CGATCGAGTG GTTCGAAAAC ACGCTGATCG GATACGTGCC GCTGCGTTTC
GCCGGCGCGC TGCGACGCGT GTACCCGGGC TTCGTCCAGC TCATCGCGTT CATGAGCATG
AACCGCGAGC GCCACGAACA GGCGCTGCGT GATCTGTATG ACCTGCGTGC GCGCGGCGAG
CATGGCAAGG CCGACGAAAT CCAGACGTTC TATAGCGAGT ACTTCGCGAC CATGGACCTG
ACGGCCGAGT TCTATCTTGA GACCATCAGC CTGGTCTTCC AGCGCTTTTT GCTGGCCCAG
AAACTGCTCG ACGTGGCGGG CCGGCGCGTT TCGACCGACG CGATCCACCG CACCACCCTG
CTGACCGTGG AAGGAGAGCG CGACGACATC TGCGCGATCG GCCAGACCAT GGCCGCGCAG
GACCTCTGCG CCAGCCTGCG CCCGTACATG CGGATGCACC ACATCCAGAC CGGCGTGGGC
CACTACGGCG TGTTCAACGG CAAACGCTGG GAATCGCAGG TCTACCCGCT GCTGCGAGAG
ACCATCCACA TGAGCGACGA GATGTTTGGC TGA
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| Protein sequence | MLYQTYQLYA DMMQPACSLA DIASTLISGY RRADNSETLR ALRAWCEVLA LARLTHYRPP
FGIDRVRING RGEYVPVTEE IVIRTPFCTL LRFRREGAPQ QPRVLLVAPM SGHFATLLRG
TVETMLRDHD VYITDWHNPR DIPLVCGRFG FDEFVHHLIT FLHVLGGNTH VVAVCQPTVA
ALAAAALMAE DGDPAQPPSL TLMAGPIDAR VNPTRVNALA TSRPIEWFEN TLIGYVPLRF
AGALRRVYPG FVQLIAFMSM NRERHEQALR DLYDLRARGE HGKADEIQTF YSEYFATMDL
TAEFYLETIS LVFQRFLLAQ KLLDVAGRRV STDAIHRTTL LTVEGERDDI CAIGQTMAAQ
DLCASLRPYM RMHHIQTGVG HYGVFNGKRW ESQVYPLLRE TIHMSDEMFG
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