Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2695 |
Symbol | nusB |
ID | 4039520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2926075 |
End bp | 2926590 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637978093 |
Product | transcription antitermination protein NusB |
Protein accession | YP_584837 |
Protein GI | 94311627 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.32403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.840878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACG CGCCCGACAC CGGCGACAAG GGCGAGGCAG CCGGCAAGCC GGCTGGCGCC AAGCCCCGCA CCGAGCCGAA GGCACCGCCG AAGAGCGCGC GTCGCCGTTC GCGCGAGCTG GCCTTGCAGG GCCTGTACCA GTGGCTGCTG AATCGCAACG ATATCGGTGC CATCCAGGCT CATCTGCACG ATGCCCAAGG CTTTAACAAG GCCGACCGCG AGCACTTCGA CGCCCTGCTG GGTGGCGCCG TGCGCGAGGA AGCACGTCTG ACGGCGGCCT TCGAGCCGTT CCTGGACCGC ACGGTCGACG AACTGTCGCC GGTCGAGCGC GCCGCGCTGC TGGTTGGCAG CTACGAACTC GTGCACTGCC TGGACATTCC GTACAAGGTC GTGATCAACG AAGCTGTCGA ACTGACCAAG ACCTTCGGCG GCGTGGAAGG CTACAAGTAC GTCAACGGCG TGCTCGACAA GCTGGCCGCG CAGGTGCGGG CGCCAGAAGT ATCAGCTCGA CGTTAA
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Protein sequence | MSDAPDTGDK GEAAGKPAGA KPRTEPKAPP KSARRRSREL ALQGLYQWLL NRNDIGAIQA HLHDAQGFNK ADREHFDALL GGAVREEARL TAAFEPFLDR TVDELSPVER AALLVGSYEL VHCLDIPYKV VINEAVELTK TFGGVEGYKY VNGVLDKLAA QVRAPEVSAR R
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