| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2688 |
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| Symbol | |
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| ID | 4039513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2919958 |
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| End bp | 2921079 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637978086 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
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| Protein accession | YP_584830 |
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| Protein GI | 94311620 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCG CCGCTGACTA CACCGCCATG GAACAGGCCC TCGCGCTCGC CGCGCGTGGC
ATGTTCACCA CCACGCCGAA CCCTCGTGTC GGCTGCGTGC TGATGAAGGA CGGGGTGGTC
ATCGGGGAAG GTTACACGCA ACCGGCCGGC CAGGATCATG CCGAGATCCA GGCCATGAAG
GATGCGATCT CGCGCGGCCA TGATCCCGCT GGCGCCACCG CCTACGTCAC GCTGGAACCG
TGCAGCCACT TCGGCCGCAC GCCACCATGT GCCGACGCGC TGGTACGCGC TGGTATCGCG
CGCGTGGTGG CTGCCATGGA AGATCCGAAT CCCACCGTAT CCGGCCGTGG CCTGCAGCGC
TTGCGCGACG CGGGCATCGA CGTCCGCTGC GGGCTGCTGG AAAAGGAAGC GCGGGATCTC
AATATCGGCT TTATCTCGCG CATGACGCGC GGACTTCCCT GGGTGCGCGT CAAGGTAGCT
GCATCCCTCG ACGGCGGCAC TGCGCTGCAC GATGGTACGA GCCAGTGGAT CACCGGCCAG
CCCGCACGCG ACGACGGGCA CGCCTGGCGC GCCCGGGCCT GCGCCATCCT GACCGGTATC
GGCACCGTCC GCGATGACAA TCCGGCACTG ACCGTGCGTG CCATCCCGAC GCCGCGGCAG
CCGCAGCGCG TGCTTGTCGA CTCACGGCTT GAAGTGCCGC TCGACGCGCA GATCCTCAAC
CGCGATACCG GCGACTTCGC CAAACCCGTG CTGGTCTTCT GTGCCATCGA AGACAAGGCC
CGCCAGCGCG CGCTCGAGGC ACGTGGCGTC GAAGTCGTGG TACTGCCCAA TCCGCATGGC
AAGGTGGAAC TGCGCCGCAT GCTGGAAGAA CTCGCGCGGC GAGGCATCAA CGAACTCCAC
GTGGAAGCGG GTTTCAAGCT CAACGGCTCA CTGATCCGCG AAGGCTGCGC GGACGAACTG
CTGGTCTACC TGGCGCCGAA GCTGCTTGGC GACGCGCAGG GCATGTTCAA CCTGCCGCCG
CTGTCGAAGC TTGAGGACGC GACCGAATTC CGCTGGCACG AAGTGCGCCA GATTGGCGAC
GATTTGCGCC TGATCGCGCG CCGCGCCGAC ACCCAACACT GA
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| Protein sequence | MFSAADYTAM EQALALAARG MFTTTPNPRV GCVLMKDGVV IGEGYTQPAG QDHAEIQAMK
DAISRGHDPA GATAYVTLEP CSHFGRTPPC ADALVRAGIA RVVAAMEDPN PTVSGRGLQR
LRDAGIDVRC GLLEKEARDL NIGFISRMTR GLPWVRVKVA ASLDGGTALH DGTSQWITGQ
PARDDGHAWR ARACAILTGI GTVRDDNPAL TVRAIPTPRQ PQRVLVDSRL EVPLDAQILN
RDTGDFAKPV LVFCAIEDKA RQRALEARGV EVVVLPNPHG KVELRRMLEE LARRGINELH
VEAGFKLNGS LIREGCADEL LVYLAPKLLG DAQGMFNLPP LSKLEDATEF RWHEVRQIGD
DLRLIARRAD TQH
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