Gene Rmet_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2676 
Symbol 
ID4039501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2910058 
End bp2911140 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content67% 
IMG OID637978074 
ProductTonB-like protein 
Protein accessionYP_584818 
Protein GI94311608 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGCC TTTCGTCCCG TCATCCGCAT CAACGGCCCG CGCGCGCGGT GGAAGCCGCC 
GCCTATCCGT ACCAGCCAGT CAAGGAACGC GGCACGCTTC GCTCGTTCCT GTTGGCGCTG
GTGATGCATC TGCTGCTCGG CATCGTGCTG TACTACGGCG TGCACTGGCA GAGCAGCACG
CCGGTGGGTG CCGAGGCGGA GCTTTGGGAA GAGGTGCCGG ACGTCGCGCC TGCACCACCA
CCTCCGCCGC GCCCGGTGGA ACTGCCGCGT CCCACGCCGC CTGAGCCTGC CGTGCGCAGC
AAGGTCGAGG AAGCGGCCGA TATCGCCCTG GAACGCCAGA AGCGCAAGCA GGCCGAAGAG
GCCGCCGAGC GCGAAGCGGC GAAGCAGGAG GCCGCGCGCA AGGAGCAGGA GCGCAAGGAC
CAGGCGAAGA AGGAACAGGA AAAGAAAGAC CAGGAAAAGA AGGAAGCCCA GCGCAAGGAA
GACCTGCGTC AGCAGCAGAT CGAGGCGCAG CGCAAGGAAG ACGCGAAGAA GAAGGCCGAC
CAGGAACGCA AGGAAGCCGC GGACGCCAAG GCGAAGGCGG AGGCTGATCA GAAGGCGAAG
GCCAAGGCTG ACGCGGATGC CAAGGCGAAG GCCGATGCCG AGCAGAAAGC CAAGGCGAAG
GCCGACGCCG ATGCCAAGGC CAAGCGTGAC GCCGCGGCCA ATGCCCAGCG CAAGAGCGAA
CTGGCCCGCC TGCAGGCAAT GGCCGGTGGC GGCGTTTCGT CCGGCGGTGG CGTCGGCAGC
GCCGCGGGTT CGGGCGCCGG ATCGGGAGGC AAGGCTTCGC CGGGCTACGC CGACCGCGTG
CGTCGCCGTG TGAAGCCGAA CATCATTTTT GGTGGCGATG TCGAGGGCAA TCCCGCAGCC
GTGGTGTCGG TCTCACTGGC GCCGGATGGT TCGCTGCTGT CGGCGCGACT GACCAGGTCG
AGCGGTAATT CGGACTGGGA CAACGCCGTG CTGCGTGCAG TGCAGCGCTC CGATCCGCTG
CCGCGCGATG AGGACGGCAA GGCACCCGCA AACTTCACGA TTACGTTCAA ACCGAAGGAT
TGA
 
Protein sequence
MASLSSRHPH QRPARAVEAA AYPYQPVKER GTLRSFLLAL VMHLLLGIVL YYGVHWQSST 
PVGAEAELWE EVPDVAPAPP PPPRPVELPR PTPPEPAVRS KVEEAADIAL ERQKRKQAEE
AAEREAAKQE AARKEQERKD QAKKEQEKKD QEKKEAQRKE DLRQQQIEAQ RKEDAKKKAD
QERKEAADAK AKAEADQKAK AKADADAKAK ADAEQKAKAK ADADAKAKRD AAANAQRKSE
LARLQAMAGG GVSSGGGVGS AAGSGAGSGG KASPGYADRV RRRVKPNIIF GGDVEGNPAA
VVSVSLAPDG SLLSARLTRS SGNSDWDNAV LRAVQRSDPL PRDEDGKAPA NFTITFKPKD