| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2675 |
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| Symbol | tolB |
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| ID | 4039500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2908503 |
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| End bp | 2909843 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978073 |
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| Product | translocation protein TolB |
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| Protein accession | YP_584817 |
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| Protein GI | 94311607 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.202485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAGC TTTGGGCCCC CAACTGGCTA TCCCGACGCC AGAACGCCAA TCCCACCCGC
GACCAGAGTC GCCATGCCTT GATGGCGTGG CTGGCTGCGG CATTGATGTC GGCGGGCGCG
GCGCACGCGC AACTGAACGT GGAGATCACC GGAGTCGGCT CGAACCAGTT CCCGGTAGCG
ACCGCCAACT TCCAGGGCGA GGCCCAGGCC CCGCAGAACC TGACCGCCAT CATCCGCAGC
GACCTGACGA ACAGCGGACG CTTCCGCAAC GTCGACCCCG CAGGTGCGAC CGTGGCCGAA
TCGGCCCAGG TGGACCTGGG CAGCTGGAAG GCGAAGGGCG CCGACGCGTT CGTGGCCGGC
AGCGTGACGC CGACCAGCAA TGGCCAGTAC GAGGTGCGTT TCCGCCTGTA CGACACCGCC
AAGGGGCAGA GCCTTGGCGG TCTGGCATTC ACCGTCACGC AGGGCCAGCT CCGCGTGACC
GCGCACAAGA TCGCCGACTA CATCTACGAG AAGCTGCTCG GCGAGCGCGG CGTGTTTGCG
ACGCGCCTGT CGTATGTGTC GAAGGTGGGC AATCGCTACC AGCTTCTGAT CTCCGATTCG
GATGGCCAGA ACGCCCAGAT CGCGCTGACC AGCACCGAAC CGATCATCTC CCCCGCGTGG
TCGCCCGATG GTCGCCGCGT GGCCTACGTC TCGTTCGAAG CCAAGAAGCC GGTGGTCTAC
GTGCATGACC TGGCAACGGG CAAGCGTGTT GTGGTGTCGA ATCAGAAGGG CAACAACAGC
GCGCCGTCCT GGTCGCCCGA TGGCCAGCAC CTGGCCGTGT CGCTCTCCCG CGACGGCAAC
ACGCAGATCT ACCAGGTCAA CGCCGATGGC TCAGGCCTGC GTCGCCTGAC CCGCAGCAGC
GCCATCGATA CGGAGCCGCA GTTCTCCCCG GATGGCCGTA GCATTTATTT CACCAGCGAT
CGCGGCGGCG CGCCGCAGAT CTACCGTATG CCGGCGTCTG GCGAGGAATC CGGCGCAGCG
CAGCGCGTGA CCTTCAAGGG CAGCTACAAC GTCAGCCCGC GTATATCGCC GGACGGCAAG
TACCTGGCCT ACATTTCGCG CAGCGGTGGC TTCAGGCTGC AACTACAGGA CCTGTCGAAC
GGTGATGTGA CGTCGCTCAC CGATACGACC AACGATGAAT CCCCGAGCTT CGCGGCCAAC
GGCAAGTACA TTCTCTATGC CACCCGCGTG GGCGGCCGCT CCGTACTGGC GGCAGTCTCC
ACGGACGGAC GCACCAAGCA GGTTCTGTCT CTCCAGTCCG GCGCTGTTCG AGAGCCGTCC
TGGGGGCCTT TCATGCAGTA A
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| Protein sequence | MRKLWAPNWL SRRQNANPTR DQSRHALMAW LAAALMSAGA AHAQLNVEIT GVGSNQFPVA
TANFQGEAQA PQNLTAIIRS DLTNSGRFRN VDPAGATVAE SAQVDLGSWK AKGADAFVAG
SVTPTSNGQY EVRFRLYDTA KGQSLGGLAF TVTQGQLRVT AHKIADYIYE KLLGERGVFA
TRLSYVSKVG NRYQLLISDS DGQNAQIALT STEPIISPAW SPDGRRVAYV SFEAKKPVVY
VHDLATGKRV VVSNQKGNNS APSWSPDGQH LAVSLSRDGN TQIYQVNADG SGLRRLTRSS
AIDTEPQFSP DGRSIYFTSD RGGAPQIYRM PASGEESGAA QRVTFKGSYN VSPRISPDGK
YLAYISRSGG FRLQLQDLSN GDVTSLTDTT NDESPSFAAN GKYILYATRV GGRSVLAAVS
TDGRTKQVLS LQSGAVREPS WGPFMQ
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