Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2674 |
Symbol | |
ID | 4039499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2907974 |
End bp | 2908483 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637978072 |
Product | OmpA/MotB |
Protein accession | YP_584816 |
Protein GI | 94311606 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0267041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCAAA TGATGACCAA ATCGCTCGCC ATTGCCGCTC TGCTGGCTCT GGGCGCCTGC AGCTCGGGTG TGAAGCTCGA CGACGCATCG AAGTCCGGCG CCGGCACCGG CGCGACCACC GACGCACGCA ATGTGGCGCC GGTCGATGTT TCGCGTGACC CGCTGAACGA CCCGAACGGC CCGCTGGCCA AGCGCAGCGT GTACTTCGAT TTCGACAGCT ACTCCGTGAA GCAGGACTAC CAAGGCATGC TGCAAGCCCA CTCGCAGTAC CTGGGCAGCA ACAAGAGCCG CAAGATCCTG ATCCAGGGCA ACACCGACGA GCGTGGCACC AGCGAGTACA ACCTGGCACT GGGCCAGAAG CGTGCCGAAG CCGTGCGCCG TTCGCTGGCT GCGATGGGTG TGCCTGACTC GCAGATGGAA GCTGTGAGCC TGGGCAAGGA AAAGCCGAAG GCAACCGGTC ACGATGATGC CTCGTGGGCC GAGAACCGTC GCGCCGATAT CGTTTACTGA
|
Protein sequence | MSQMMTKSLA IAALLALGAC SSGVKLDDAS KSGAGTGATT DARNVAPVDV SRDPLNDPNG PLAKRSVYFD FDSYSVKQDY QGMLQAHSQY LGSNKSRKIL IQGNTDERGT SEYNLALGQK RAEAVRRSLA AMGVPDSQME AVSLGKEKPK ATGHDDASWA ENRRADIVY
|
| |