Gene Rmet_2630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2630 
SymbolvalS 
ID4039456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2864652 
End bp2867519 
Gene Length2868 bp 
Protein Length955 aa 
Translation table11 
GC content65% 
IMG OID637978031 
Productvalyl-tRNA synthetase 
Protein accessionYP_584776 
Protein GI94311566 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0525] Valyl-tRNA synthetase 
TIGRFAM ID[TIGR00422] valyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00324916 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAG AAGACCAGTC CCTAGCCAAG AGCTTCGAAC CCGCCGCCAT CGAGGCGAAA 
TGGGGCCCAG AATGGGAGCG GCGCGGCATT GCCCAGCCCA CGTTCGACGC CAATCGCCCC
GATTTCGCCA TCCAGCTGCC GCCGCCCAAT GTGACCGGCA CGCTGCACAT GGGCCATGCG
TTCAACCAGA CAATCATGGA CGGCCTGACC CGCCATGCAC GTATGCGCGG CGCCAACACG
CTGTGGGTGC CGGGCACCGA CCACGCCGGC ATCGCCACGC AGATCGTCGT GGAACGCCAG
CTCGAGGCGC AAGGTGTATC GCGCCACGAC CTGGGCCGCG CCAAGTTCAC CGAGAAGGTC
TGGGAGTGGA AGGAAGAATC GGGCTCGACG ATCACGCGCC AGGTGCGCCG CATGGGCGCG
TCGATCGACT GGACGCGCGA GTACTTCACG ATGTCGCCCG AGATGTCGAA GGCCGTGACC
GAGGTGTTCG TCCGCCTGCA TGAGCAAGGC CTGATCTACC GTGGCAAGCG GCTGGTGAAC
TGGGATCCGG TGCTTGGCAC TGCCGTGTCC GACCTGGAAG TCGACAGCGT CGAGGAAGAC
GGTTCGCTGT GGCACATCCA TTACCCGCTG GCCGAGCCGG ACACCGTACG CGGCTTGACC
CACCTGACCG TGGCTACCAC CCGTCCCGAG ACGATGCTCG GCGACACGGC GGTGATGGTG
CACCCAGAGG ATGAGCGCTA CGCCCACCTG ATCGGCAAAT TCGTACATCT GCCGCTGACC
GATCGCAAGA TCCCGGTCAT CGCCGACGAA TACGTGGACC GCGAGTTCGG CACCGGTGTG
GTCAAGGTGA CCCCGGGCCA CGACTTCAAC GACTACGCCG TGGGTCAGCG CCACAACCTG
CCGCAACTGT CGATCCTGAC GCTCGACGCG AAGATCGTCG CCGATGCGCC GGCCGCCTAC
GCCGGCATGG ATCGCTTCGA CGCGCGCAAG AAGATGGTGG CAGACCTTGA GGCGCAGGGC
CTGCTGGGCG AGGTCAAGAA GCACAAGCTG ATGGTGCCGC GCAGCGAGCG CACCAGCAGC
GTGATCGAAC CGATGCTGAC GGACCAGTGG TTCGTGGCCA TGAGCAAGCC GGCCCCGGAA
GGCACATTCA ACCCGGGTCG CTCGATCGCC GAAGTCGCGC TCGAGGCCGT GCAGAGCGGC
GAGATCAAGC TCGTGCCGGA AAACTGGATC AGCACGTACA ACCAGTGGCT GTCGAACATC
CAGGACTGGT GTATCAGCCG CCAGCTCTGG TGGGGCCACC AGATTCCCGC CTGGTACGAC
GATGCCGGCA ACTGTTTCGT GGCGCGCACC GAAGAGGAGG CACGCGCGAA GGCCCAGGCC
GCCGGCAGCA CCGGCGCGCT GCGCCGCGAG GAAGACGTGC TCGACACGTG GTTCTCGTCC
GCGCTGGTTC CGTTCTCGTC GCTGGGCTGG CCCGAGAACA CGCCCGAGAT CCAGCACTTC
CTGCCGTCGT CGGTGCTCGT GACCGGCTAC GACATCATCT TCTTCTGGGT GGCGCGCATG
GTCATGATGA CCAAGCACTT CACCGGCAAG GTGCCGTTCC ACACCGTGTA CGTGCACGGC
CTGGTGCGGG ACTCCGAAGG CAAGAAGATG AGCAAGTCCG AGGGCAACAC GCTCGATCCG
GTGGACCTGA TCGACGGTAT CGCGCTCGAA CCGCTGCTCA AGAAGCGCAC CACCGGCCTG
CGTCGTCCGA AGGATGCGCC GAAGATCGAA TCGAAGACGA AGAAGGAATT CCCGGACGGC
ATTCCCGCAT TCGGCGCCGA CGCGCTGCGC TTCACGTTTG CGTCGCTGGC CACGCTGGGT
CGCAACATCA ACTTCGACAC CGGCCGTTGC GAGGGCTATC GCAACTTCTG CAACAAGCTC
TGGAACGCCA CGCGTTTCGT GCTGATGAAC ACCGAGGGCC ATGACTGCGG CATGGGCCCG
TGCAACAACG ATTGCGGCCC GGACGGCTAC CTGCACTTCT CGCAGGCCGA CCGCTGGATC
GTATCGCTGC TGCAGCGCGT GGAAGCGGAA GTCGAGAAGG GCTTCGCCGA GTACCGCTTC
GACAACATCG CCAGTGCGAT CTACAAGTTC GTCTGGGACG AATACTGCGA CTGGTACCTG
GAGATGGCCA AGGTCCAGAT CCAGACCGGG ACCGAAGCCC AGCAACGCGC CACGCGCCGC
ACGCTGCTGC GCGTGCTGGA AACGGTGCTG CGCCTGGCCC ACCCGATCAT CCCGTTCATC
ACCGAGGAAC TGTGGCAGAA GGTGGCCCCG CTGGCCGGCC GTGCCAAGGG CGATGGCAGC
GAGTCGATCG CCACGCAGGA TTACCCGCTG AGCGCCGCGG CCAAGATCGA CGAAGCCGCC
GAAGCCTGGG TGGCCCGCCT CAAGTCGGTG GTCGACGCCT GCCGCAACCT GCGCGGCGAG
ATGAATATCT CGCCGGCCCA GCGCATCCCG CTCTATGCTC AAGGAGACAG CGCGTTCCTG
AAGGAAGCGG CGGCGCAAAT CCAGGCGCTG GCGAAACTTT CCGAGGTCAA GGTGTTCGAA
GACGAGGCCA CGCTGCAGAA GGAAGGCGCC GGCGCCCCTG TGGCGATCGC CGACGGCAAC
CACCTGCTTC TCAAGATCGA GATCGACGTG GCTGCTGAAC GCGTGCGCCT GGGCAAGGAG
ATCGACCGTA TCTCCGGCGA AATCGGCAAA TGCCGTGGCA AGCTGTCCAA CGAGAGCTTC
GTCGCCAAGG CACCGCCGGC CGTCGTGGCT CAGGAAACGC AGCGTTTGTC CGATTTCGAA
CAGACGCTGG TCAAGCTTCA GGATCAACTA CAGCGATTGC CTGCCTGA
 
Protein sequence
MTAEDQSLAK SFEPAAIEAK WGPEWERRGI AQPTFDANRP DFAIQLPPPN VTGTLHMGHA 
FNQTIMDGLT RHARMRGANT LWVPGTDHAG IATQIVVERQ LEAQGVSRHD LGRAKFTEKV
WEWKEESGST ITRQVRRMGA SIDWTREYFT MSPEMSKAVT EVFVRLHEQG LIYRGKRLVN
WDPVLGTAVS DLEVDSVEED GSLWHIHYPL AEPDTVRGLT HLTVATTRPE TMLGDTAVMV
HPEDERYAHL IGKFVHLPLT DRKIPVIADE YVDREFGTGV VKVTPGHDFN DYAVGQRHNL
PQLSILTLDA KIVADAPAAY AGMDRFDARK KMVADLEAQG LLGEVKKHKL MVPRSERTSS
VIEPMLTDQW FVAMSKPAPE GTFNPGRSIA EVALEAVQSG EIKLVPENWI STYNQWLSNI
QDWCISRQLW WGHQIPAWYD DAGNCFVART EEEARAKAQA AGSTGALRRE EDVLDTWFSS
ALVPFSSLGW PENTPEIQHF LPSSVLVTGY DIIFFWVARM VMMTKHFTGK VPFHTVYVHG
LVRDSEGKKM SKSEGNTLDP VDLIDGIALE PLLKKRTTGL RRPKDAPKIE SKTKKEFPDG
IPAFGADALR FTFASLATLG RNINFDTGRC EGYRNFCNKL WNATRFVLMN TEGHDCGMGP
CNNDCGPDGY LHFSQADRWI VSLLQRVEAE VEKGFAEYRF DNIASAIYKF VWDEYCDWYL
EMAKVQIQTG TEAQQRATRR TLLRVLETVL RLAHPIIPFI TEELWQKVAP LAGRAKGDGS
ESIATQDYPL SAAAKIDEAA EAWVARLKSV VDACRNLRGE MNISPAQRIP LYAQGDSAFL
KEAAAQIQAL AKLSEVKVFE DEATLQKEGA GAPVAIADGN HLLLKIEIDV AAERVRLGKE
IDRISGEIGK CRGKLSNESF VAKAPPAVVA QETQRLSDFE QTLVKLQDQL QRLPA