Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2630 |
Symbol | valS |
ID | 4039456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2864652 |
End bp | 2867519 |
Gene Length | 2868 bp |
Protein Length | 955 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637978031 |
Product | valyl-tRNA synthetase |
Protein accession | YP_584776 |
Protein GI | 94311566 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00324916 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAG AAGACCAGTC CCTAGCCAAG AGCTTCGAAC CCGCCGCCAT CGAGGCGAAA TGGGGCCCAG AATGGGAGCG GCGCGGCATT GCCCAGCCCA CGTTCGACGC CAATCGCCCC GATTTCGCCA TCCAGCTGCC GCCGCCCAAT GTGACCGGCA CGCTGCACAT GGGCCATGCG TTCAACCAGA CAATCATGGA CGGCCTGACC CGCCATGCAC GTATGCGCGG CGCCAACACG CTGTGGGTGC CGGGCACCGA CCACGCCGGC ATCGCCACGC AGATCGTCGT GGAACGCCAG CTCGAGGCGC AAGGTGTATC GCGCCACGAC CTGGGCCGCG CCAAGTTCAC CGAGAAGGTC TGGGAGTGGA AGGAAGAATC GGGCTCGACG ATCACGCGCC AGGTGCGCCG CATGGGCGCG TCGATCGACT GGACGCGCGA GTACTTCACG ATGTCGCCCG AGATGTCGAA GGCCGTGACC GAGGTGTTCG TCCGCCTGCA TGAGCAAGGC CTGATCTACC GTGGCAAGCG GCTGGTGAAC TGGGATCCGG TGCTTGGCAC TGCCGTGTCC GACCTGGAAG TCGACAGCGT CGAGGAAGAC GGTTCGCTGT GGCACATCCA TTACCCGCTG GCCGAGCCGG ACACCGTACG CGGCTTGACC CACCTGACCG TGGCTACCAC CCGTCCCGAG ACGATGCTCG GCGACACGGC GGTGATGGTG CACCCAGAGG ATGAGCGCTA CGCCCACCTG ATCGGCAAAT TCGTACATCT GCCGCTGACC GATCGCAAGA TCCCGGTCAT CGCCGACGAA TACGTGGACC GCGAGTTCGG CACCGGTGTG GTCAAGGTGA CCCCGGGCCA CGACTTCAAC GACTACGCCG TGGGTCAGCG CCACAACCTG CCGCAACTGT CGATCCTGAC GCTCGACGCG AAGATCGTCG CCGATGCGCC GGCCGCCTAC GCCGGCATGG ATCGCTTCGA CGCGCGCAAG AAGATGGTGG CAGACCTTGA GGCGCAGGGC CTGCTGGGCG AGGTCAAGAA GCACAAGCTG ATGGTGCCGC GCAGCGAGCG CACCAGCAGC GTGATCGAAC CGATGCTGAC GGACCAGTGG TTCGTGGCCA TGAGCAAGCC GGCCCCGGAA GGCACATTCA ACCCGGGTCG CTCGATCGCC GAAGTCGCGC TCGAGGCCGT GCAGAGCGGC GAGATCAAGC TCGTGCCGGA AAACTGGATC AGCACGTACA ACCAGTGGCT GTCGAACATC CAGGACTGGT GTATCAGCCG CCAGCTCTGG TGGGGCCACC AGATTCCCGC CTGGTACGAC GATGCCGGCA ACTGTTTCGT GGCGCGCACC GAAGAGGAGG CACGCGCGAA GGCCCAGGCC GCCGGCAGCA CCGGCGCGCT GCGCCGCGAG GAAGACGTGC TCGACACGTG GTTCTCGTCC GCGCTGGTTC CGTTCTCGTC GCTGGGCTGG CCCGAGAACA CGCCCGAGAT CCAGCACTTC CTGCCGTCGT CGGTGCTCGT GACCGGCTAC GACATCATCT TCTTCTGGGT GGCGCGCATG GTCATGATGA CCAAGCACTT CACCGGCAAG GTGCCGTTCC ACACCGTGTA CGTGCACGGC CTGGTGCGGG ACTCCGAAGG CAAGAAGATG AGCAAGTCCG AGGGCAACAC GCTCGATCCG GTGGACCTGA TCGACGGTAT CGCGCTCGAA CCGCTGCTCA AGAAGCGCAC CACCGGCCTG CGTCGTCCGA AGGATGCGCC GAAGATCGAA TCGAAGACGA AGAAGGAATT CCCGGACGGC ATTCCCGCAT TCGGCGCCGA CGCGCTGCGC TTCACGTTTG CGTCGCTGGC CACGCTGGGT CGCAACATCA ACTTCGACAC CGGCCGTTGC GAGGGCTATC GCAACTTCTG CAACAAGCTC TGGAACGCCA CGCGTTTCGT GCTGATGAAC ACCGAGGGCC ATGACTGCGG CATGGGCCCG TGCAACAACG ATTGCGGCCC GGACGGCTAC CTGCACTTCT CGCAGGCCGA CCGCTGGATC GTATCGCTGC TGCAGCGCGT GGAAGCGGAA GTCGAGAAGG GCTTCGCCGA GTACCGCTTC GACAACATCG CCAGTGCGAT CTACAAGTTC GTCTGGGACG AATACTGCGA CTGGTACCTG GAGATGGCCA AGGTCCAGAT CCAGACCGGG ACCGAAGCCC AGCAACGCGC CACGCGCCGC ACGCTGCTGC GCGTGCTGGA AACGGTGCTG CGCCTGGCCC ACCCGATCAT CCCGTTCATC ACCGAGGAAC TGTGGCAGAA GGTGGCCCCG CTGGCCGGCC GTGCCAAGGG CGATGGCAGC GAGTCGATCG CCACGCAGGA TTACCCGCTG AGCGCCGCGG CCAAGATCGA CGAAGCCGCC GAAGCCTGGG TGGCCCGCCT CAAGTCGGTG GTCGACGCCT GCCGCAACCT GCGCGGCGAG ATGAATATCT CGCCGGCCCA GCGCATCCCG CTCTATGCTC AAGGAGACAG CGCGTTCCTG AAGGAAGCGG CGGCGCAAAT CCAGGCGCTG GCGAAACTTT CCGAGGTCAA GGTGTTCGAA GACGAGGCCA CGCTGCAGAA GGAAGGCGCC GGCGCCCCTG TGGCGATCGC CGACGGCAAC CACCTGCTTC TCAAGATCGA GATCGACGTG GCTGCTGAAC GCGTGCGCCT GGGCAAGGAG ATCGACCGTA TCTCCGGCGA AATCGGCAAA TGCCGTGGCA AGCTGTCCAA CGAGAGCTTC GTCGCCAAGG CACCGCCGGC CGTCGTGGCT CAGGAAACGC AGCGTTTGTC CGATTTCGAA CAGACGCTGG TCAAGCTTCA GGATCAACTA CAGCGATTGC CTGCCTGA
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Protein sequence | MTAEDQSLAK SFEPAAIEAK WGPEWERRGI AQPTFDANRP DFAIQLPPPN VTGTLHMGHA FNQTIMDGLT RHARMRGANT LWVPGTDHAG IATQIVVERQ LEAQGVSRHD LGRAKFTEKV WEWKEESGST ITRQVRRMGA SIDWTREYFT MSPEMSKAVT EVFVRLHEQG LIYRGKRLVN WDPVLGTAVS DLEVDSVEED GSLWHIHYPL AEPDTVRGLT HLTVATTRPE TMLGDTAVMV HPEDERYAHL IGKFVHLPLT DRKIPVIADE YVDREFGTGV VKVTPGHDFN DYAVGQRHNL PQLSILTLDA KIVADAPAAY AGMDRFDARK KMVADLEAQG LLGEVKKHKL MVPRSERTSS VIEPMLTDQW FVAMSKPAPE GTFNPGRSIA EVALEAVQSG EIKLVPENWI STYNQWLSNI QDWCISRQLW WGHQIPAWYD DAGNCFVART EEEARAKAQA AGSTGALRRE EDVLDTWFSS ALVPFSSLGW PENTPEIQHF LPSSVLVTGY DIIFFWVARM VMMTKHFTGK VPFHTVYVHG LVRDSEGKKM SKSEGNTLDP VDLIDGIALE PLLKKRTTGL RRPKDAPKIE SKTKKEFPDG IPAFGADALR FTFASLATLG RNINFDTGRC EGYRNFCNKL WNATRFVLMN TEGHDCGMGP CNNDCGPDGY LHFSQADRWI VSLLQRVEAE VEKGFAEYRF DNIASAIYKF VWDEYCDWYL EMAKVQIQTG TEAQQRATRR TLLRVLETVL RLAHPIIPFI TEELWQKVAP LAGRAKGDGS ESIATQDYPL SAAAKIDEAA EAWVARLKSV VDACRNLRGE MNISPAQRIP LYAQGDSAFL KEAAAQIQAL AKLSEVKVFE DEATLQKEGA GAPVAIADGN HLLLKIEIDV AAERVRLGKE IDRISGEIGK CRGKLSNESF VAKAPPAVVA QETQRLSDFE QTLVKLQDQL QRLPA
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