Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2629 |
Symbol | |
ID | 4039455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2862070 |
End bp | 2864433 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637978030 |
Product | ATP-dependent DNA helicase UvrD |
Protein accession | YP_584775 |
Protein GI | 94311565 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0417333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.559326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGTC TGCTCGCCAA TCTCAACGCT GAACAACTCG CCGCCGTCAC ATTACCTGAC GAGCCGGCCC TGATCCTGGC CGGTGCGGGC AGTGGCAAGA CCCGTGTGCT GACCACGCGG ATCGCGTGGC TGATCCAGAA CGGCCGTGTG TCCCCGGCCG GCATCCTGGC GGTGACCTTC ACGAACAAGG CCGCCAAGGA GATGCAGACC CGGCTGTCGT CGATGTTGCC GATCAACACC CGGGGCATGT GGATCGGCAC GTTCCATGGC CTCTGCAACC GGATGCTGCG TGCGCATTTC CGTGACGCCG GCTTGCCCCA GACATTTGCC ATCCTGGACT CCCAGGACCA GCTTTCGGCG ATCAAGCGGC TGCTCAAGGG GCTGAATGTC GACGACGAAA AGTACCCACC CAAGAATCTC CAGTACTTCA TCAACAACGC CAAGGAGCAG GGCCTGCGCC CGGCCGACGT CGAAGCCAAT GACGATTTCA ATCGTCGCTT CGTCGACCTG TACGCGGCCT ACGACGAGCA GTGCCAGCGC GAGGGCGTGG TCGACTTCGC CGAACTGTTG CTGCGCTGCT ACGAACTGCT GCGTTACAAC GACGCGATCC GCCAGCACTA CCAGCACCGT TTCCGCCATG TGCTCGTCGA CGAGTTCCAG GACACCAACG TGCTGCAGTA CCAGTGGCTC AAGCTGCTTG CCGGCTACGG CTCGGGCAAT GCCGCGGCAG TGTTCGCCGT GGGCGACGAT GACCAGAGCA TCTACGCGTT CCGTGGCGCC AACGTCGGCA ATATGCGCGA CTTCGAGCAG GAATTCCGCG TTCGCCACCT GATCAAGCTC GAGCAGAACT ACCGCTCGCA CGGGCATATT CTCGATTCGG CCAACCACCT GATCTCGCAC AATGCGCGCC GACTGGGCAA GAACCTGCGC ACCGACGCCG GGCACGGCGA GCCGGTGCGC GTGTTCCAGG CAGGTTCGGA CGGCCAGGAA GCCTCGTGGA TCGTCGAGGA AATCCGCGAC CAGATCGCGC AGGGCATGTC GCGCTCGGAG ATCGCGATCC TCTATCGCAG CAATGCGCAG TCGCGGGTCA TCGAACACGC GCTGTTCTCG TCGGGTATCC CGTACCGGGT GTACGGCGGC CTGCGCTTCT TCGAGCGCGC CGAAGTGAAG CACGCGCTGG CCTACCTGCA GTTGATCGAG AACCCTCGCA ATGACGCCGC ATTCGGGCGG GTGGTCAATT TCCCCACGCG CGGCATCGGC GCGAAGTCGC TCGAAGTGCT GCAGGACGCA GCGCGGCAGT ACAACTGTTC ACTGGCCGAA GCCGTGGCCT ACGTGCCTGG CAAGGCCGGC AGCTCGTTGG GCGCCTTTAT CCGGCTGATC GAGCAGATGC GTGCCGAGAC CAGCCGGATG ACGCTGGCGC AAACGGTCGA GTACGTGACC AACACCAGCG GCCTGATGAC GCATTACCAG ACCGAGAAGG AAGGCCAGGA CCGCATCGAG AACTTGCAGG AACTGGTGAC GGCCGCGCAG GCATTCGTGG TCGAGGAAGG CTACGGGCTC GAGGCGCTGG GCCGCATGCT GCCGGCGAAC CGCGATGCCA TGCCGGCGCT GGCGCAGGGC GAACAGGACC AGCAGGTGCT GGACCCCGAA CAGTTGCCGG TGGTGATGAC GCCGCTGGTG GCGTTCCTGA CCCATGCATC ACTGGAGGCG GGGGACAACC AGGCGCAGGC CGGCCAGGAT GCGGTGCAAA TGATGACCGT GCACGCGGCC AAGGGGCTCG AGTTCAATGT GGTGTTTATC ACCGGGCTCG AGGAAGGCCT GTTCCCGCAC GAGAACAGCG CGATGGAAGC CGACGGTCTG GAGGAAGAAC GCCGCCTGAT GTATGTGGCC ATCACGCGCG CGCGGGCACG GCTCTATCTG TCGTTCGCCC AAAGCCGCGT GCTGCACGGC CAGATGCGCT ATCACGTGCG GTCGCGCTTC TTCGAGGAGC TTCCCGAGGC TTCGCTGAAG TGGATCACTC CGCAGGGCCA GGCCTATGGT GCCTATGGCT CAGGTAGCGG ACGCCAGTCA TCTGAGCGCG AAAGCGCTTG GGGCCGTGAC TGGTTCAAGC GTGCCGAGGA CGTGCCCTAT ACCGGCGTCA AGCCGACCGG CGGCATGGAC ACCGGCAAGA ACTACGCCGA AGAGAAGCGC GCCGCGGCCA CTGGATTCCG CGTGGGCCAG AGCGTGTTCC ACAACAAGTT CGGGGAAGGC AAGATCAAGG CGCTGGAAGG CGAGGGCGCC GATGCGCGCG CGAACATCGA CTTCAAGCGT CACGGCACCA AGTGGCTGGC GCTGTCGGTG GCGAAGCTGG ACGCGATTGA TTGA
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Protein sequence | MSSLLANLNA EQLAAVTLPD EPALILAGAG SGKTRVLTTR IAWLIQNGRV SPAGILAVTF TNKAAKEMQT RLSSMLPINT RGMWIGTFHG LCNRMLRAHF RDAGLPQTFA ILDSQDQLSA IKRLLKGLNV DDEKYPPKNL QYFINNAKEQ GLRPADVEAN DDFNRRFVDL YAAYDEQCQR EGVVDFAELL LRCYELLRYN DAIRQHYQHR FRHVLVDEFQ DTNVLQYQWL KLLAGYGSGN AAAVFAVGDD DQSIYAFRGA NVGNMRDFEQ EFRVRHLIKL EQNYRSHGHI LDSANHLISH NARRLGKNLR TDAGHGEPVR VFQAGSDGQE ASWIVEEIRD QIAQGMSRSE IAILYRSNAQ SRVIEHALFS SGIPYRVYGG LRFFERAEVK HALAYLQLIE NPRNDAAFGR VVNFPTRGIG AKSLEVLQDA ARQYNCSLAE AVAYVPGKAG SSLGAFIRLI EQMRAETSRM TLAQTVEYVT NTSGLMTHYQ TEKEGQDRIE NLQELVTAAQ AFVVEEGYGL EALGRMLPAN RDAMPALAQG EQDQQVLDPE QLPVVMTPLV AFLTHASLEA GDNQAQAGQD AVQMMTVHAA KGLEFNVVFI TGLEEGLFPH ENSAMEADGL EEERRLMYVA ITRARARLYL SFAQSRVLHG QMRYHVRSRF FEELPEASLK WITPQGQAYG AYGSGSGRQS SERESAWGRD WFKRAEDVPY TGVKPTGGMD TGKNYAEEKR AAATGFRVGQ SVFHNKFGEG KIKALEGEGA DARANIDFKR HGTKWLALSV AKLDAID
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