Gene Rmet_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2604 
Symbol 
ID4039429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2831670 
End bp2832482 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID637978004 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_584750 
Protein GI94311540 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.159561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.144128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC ATCTGCAAGG CAAGGTGGCA TTGGTAACTG GAGGCGGACA AGGCGTAGGC 
CGACGCATCT GCCTGGAACT CGCCGGCGAA GGCGTCAAGG TGGTGATCAA CGACTACTTC
CTGGAGCGCG CGCAGGCGGT GCAAAAGGAG ATCGAAGCAG CGGGCGGCCA GGCATTGGCC
GTGCAGGCAG ATATCGGCGA CTCGGAACAG GTGGAACGCA TGTTCGCGGC GGCGCGTGAA
CGCTTCGGCG ACGTCGATAT CCTGGTGAAC AACGCCGGCG TGACCGTGGC GCGTCGCACC
AAGGGCGGTA TGCCCCCAAC GTTCATGGAA ATGCCGGTGG AAGACTGGAA GGAAGTCGTC
GACCTGAACA TCTACGGCGT GATGAACTGC TGCCACAGCG CCCTGCCCGG CATGCAACGC
AAGGGCGGCG GCAAGATTGT CAACATCATG TCCGAAGCCG GACGCGTCGG CGAGGCACGC
CTGGCGGTCT ACTCGGGCGC CAAGGCCGCC ATGCTGGGCT TCGCGAAGGC GATCGCGCAG
GAGCACGGCC GTGACTGCAT CAACGTGAAC ACCATCGCAC TGGGCGCGGT GTCGCACGAG
GGGATCGCCA ACGGCCCGCT GCATCCGTCG TCCACCCCCG AGACCGACGA TCGCCTCAAG
AAAATGCTCG GCGCCTACCC GATCGCACGC GGGCTCGGCA GGCTGTCACG GCCCGAGGAC
ATCTCGGGCG TGGTGGCTTT CCTGGCATCG GATCGCGCGG CCTTCATCAC CGGCCAGAGC
CTTGGTGTGA GTGGCGGCTA CGTGATGCTC TGA
 
Protein sequence
MELHLQGKVA LVTGGGQGVG RRICLELAGE GVKVVINDYF LERAQAVQKE IEAAGGQALA 
VQADIGDSEQ VERMFAAARE RFGDVDILVN NAGVTVARRT KGGMPPTFME MPVEDWKEVV
DLNIYGVMNC CHSALPGMQR KGGGKIVNIM SEAGRVGEAR LAVYSGAKAA MLGFAKAIAQ
EHGRDCINVN TIALGAVSHE GIANGPLHPS STPETDDRLK KMLGAYPIAR GLGRLSRPED
ISGVVAFLAS DRAAFITGQS LGVSGGYVML