Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2604 |
Symbol | |
ID | 4039429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2831670 |
End bp | 2832482 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637978004 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_584750 |
Protein GI | 94311540 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.159561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.144128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGC ATCTGCAAGG CAAGGTGGCA TTGGTAACTG GAGGCGGACA AGGCGTAGGC CGACGCATCT GCCTGGAACT CGCCGGCGAA GGCGTCAAGG TGGTGATCAA CGACTACTTC CTGGAGCGCG CGCAGGCGGT GCAAAAGGAG ATCGAAGCAG CGGGCGGCCA GGCATTGGCC GTGCAGGCAG ATATCGGCGA CTCGGAACAG GTGGAACGCA TGTTCGCGGC GGCGCGTGAA CGCTTCGGCG ACGTCGATAT CCTGGTGAAC AACGCCGGCG TGACCGTGGC GCGTCGCACC AAGGGCGGTA TGCCCCCAAC GTTCATGGAA ATGCCGGTGG AAGACTGGAA GGAAGTCGTC GACCTGAACA TCTACGGCGT GATGAACTGC TGCCACAGCG CCCTGCCCGG CATGCAACGC AAGGGCGGCG GCAAGATTGT CAACATCATG TCCGAAGCCG GACGCGTCGG CGAGGCACGC CTGGCGGTCT ACTCGGGCGC CAAGGCCGCC ATGCTGGGCT TCGCGAAGGC GATCGCGCAG GAGCACGGCC GTGACTGCAT CAACGTGAAC ACCATCGCAC TGGGCGCGGT GTCGCACGAG GGGATCGCCA ACGGCCCGCT GCATCCGTCG TCCACCCCCG AGACCGACGA TCGCCTCAAG AAAATGCTCG GCGCCTACCC GATCGCACGC GGGCTCGGCA GGCTGTCACG GCCCGAGGAC ATCTCGGGCG TGGTGGCTTT CCTGGCATCG GATCGCGCGG CCTTCATCAC CGGCCAGAGC CTTGGTGTGA GTGGCGGCTA CGTGATGCTC TGA
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Protein sequence | MELHLQGKVA LVTGGGQGVG RRICLELAGE GVKVVINDYF LERAQAVQKE IEAAGGQALA VQADIGDSEQ VERMFAAARE RFGDVDILVN NAGVTVARRT KGGMPPTFME MPVEDWKEVV DLNIYGVMNC CHSALPGMQR KGGGKIVNIM SEAGRVGEAR LAVYSGAKAA MLGFAKAIAQ EHGRDCINVN TIALGAVSHE GIANGPLHPS STPETDDRLK KMLGAYPIAR GLGRLSRPED ISGVVAFLAS DRAAFITGQS LGVSGGYVML
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