Gene Rmet_2603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2603 
Symbol 
ID4039428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2830824 
End bp2831615 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID637978003 
Productshort chain enoyl-CoA hydratase 
Protein accessionYP_584749 
Protein GI94311539 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.167852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.240881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCG AAACCCTGTT GTACGAAGTG GTCGACGGCG TGGCCATCAT CCGGCTAAAC 
CGCCCGGATC GCATGAACAC ACTCGGCGGC ACCATGAAAC CCGATCTCGC CCGCGCGTTC
TTCGAGTTGG CCCGTGATGA CACCAGCGTT CGCTGTGTAG TGCTGACCGG CACCGGCGAT
AGAGCATTCT GCGCGGGCGC CGACATCAAG GAACGCGCCG GCGGCACGGC CCACCCCGCC
GACTACTACG TCACGCAGCA ACGCACGCAC GAGCTGTTCC GTGGCATCGA GGAATTCGAG
AAACCGGTGA TCGCCGCCAT CAATGGCGTA GCGCTCGGCG GCGGCCTGGA ACTGGCCCTG
TGCGCCGACA TCCGCCTGGC CGCCAGATCG GCACGATTCG GCCTGCCAGA GATCAAGCTC
GGCGTCATTC CCGCGGCGGG CGGCACGCAG CGCCTGCCGC GCGTGGTGGG TCCGGCCATC
GCCAAGGAAC TGATCTTTAC CAGCGAACTG ATCAACGCCG ACGCCGCGAA AGACATCCGC
CTGGTGAACC GTGTGATCGA CGACGACAAG CTGATGGATG CGGCACTGAC GATGGCCAGG
CGCATCGCCG CGCAACCACC GCTGGCCGTG CGCTTCGCCA AGCGGTCGGT CAACCTGGGC
ATGCAGGGCT CGGTCGACAT GGGCCTGCAG TTCGAATGCT ACGGCGCGGC CATGGTGATG
GACAGCGAGG ACAGGAAGGA AGGGATGCGC GCATTCGTCG AGAAGCGCGA GCCCCGGTTC
GTCGGGCGCT AG
 
Protein sequence
MQFETLLYEV VDGVAIIRLN RPDRMNTLGG TMKPDLARAF FELARDDTSV RCVVLTGTGD 
RAFCAGADIK ERAGGTAHPA DYYVTQQRTH ELFRGIEEFE KPVIAAINGV ALGGGLELAL
CADIRLAARS ARFGLPEIKL GVIPAAGGTQ RLPRVVGPAI AKELIFTSEL INADAAKDIR
LVNRVIDDDK LMDAALTMAR RIAAQPPLAV RFAKRSVNLG MQGSVDMGLQ FECYGAAMVM
DSEDRKEGMR AFVEKREPRF VGR