Gene Rmet_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2590 
SymbolpdxA 
ID4039415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2816488 
End bp2817489 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID637977990 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_584736 
Protein GI94311526 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.536019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT ACATTCCTGT CATCGGCATC ACGATGGGTG ATGCCACGGG CATCGGGCCC 
GAAGTCATCG TCAAGAGCCT GGCCCACGAA ACCGTCTACG CCCAATGCCG CCCGCTGGTT
ATCGGCGATG CGCGCCGTCT CGAGCAGGCA GGCAGGCTCG TCAACTCGGC ACTCAAGATC
CGCGCGATCC AGTCGCCCGA GGAAGCACGC TTCGAGCCGG GCACGATCGA TTGCATCGAC
CTGGGCCTGA TCCCCGAAGA CCTGCCGTTC GGCAAACTGT CTGCCGTGGC GGGCGACGCG
GCGTTCCGCT ACATCGAGCG CGCGGTCAGA CTGGCGCAGG AAGAAAAGAT CGATGCGATC
TGCACCGCGC CGCTGAACAA GGAAGCCCTG CACGCGGGCG GCCACAAGTT TCCGGGCCAC
ACCGAGATGC TGGCGCACCT GACCGGCACG CCCGAAGTCT CGATGATGCT CGTCGCGCCG
AAGCTGCGCG TGATTCACGT CACCACGCAC ATCGGCCTGC TTGATGCCAT CCGCAAGATC
GAACCCGGTC TGGTACAGCG CACGATCGAG CGCGGCCAGG TGACGCTGCA GCGCGCGGGC
ATCGCTGCCC CGCGCATCGG CGTCTGCGGC ATCAACCCGC ACGCTGGCGA GAACGGCCTG
TTCGGTCACG GCGAGGAAGA GCAGAAGATC ATTCCGGCCG TGGAAGCGCT GCGCGCGCGC
GGCTGGGACG TGGAAGGCCC GCTGCCGGCC GATACACTGT TCTACCGCGC CGGCCGTGGC
GATTTCGACC TCGTGGTGGC CATGTATCAC GATCAGGGCC ATGGCCCGGT CAAGGTGCTT
GGCCTGGAAG CCGGCGTGAA CATCACCGTG GGCCTGCCAG TCATCCGCAC GTCGGTGGAC
CACGGCACCG CGTTCGACAT CGCCGGCAAG GGCATCGCCG ACGAACGCAG CCTGCTGGAA
GCATTGCGCC AGGGCGCGGA GCTGGCTACC CGCCGCGCGT GA
 
Protein sequence
MSDYIPVIGI TMGDATGIGP EVIVKSLAHE TVYAQCRPLV IGDARRLEQA GRLVNSALKI 
RAIQSPEEAR FEPGTIDCID LGLIPEDLPF GKLSAVAGDA AFRYIERAVR LAQEEKIDAI
CTAPLNKEAL HAGGHKFPGH TEMLAHLTGT PEVSMMLVAP KLRVIHVTTH IGLLDAIRKI
EPGLVQRTIE RGQVTLQRAG IAAPRIGVCG INPHAGENGL FGHGEEEQKI IPAVEALRAR
GWDVEGPLPA DTLFYRAGRG DFDLVVAMYH DQGHGPVKVL GLEAGVNITV GLPVIRTSVD
HGTAFDIAGK GIADERSLLE ALRQGAELAT RRA