| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2589 |
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| Symbol | |
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| ID | 4039414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2815225 |
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| End bp | 2816457 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637977989 |
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| Product | type III effector Hrp-dependent protein |
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| Protein accession | YP_584735 |
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| Protein GI | 94311525 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.735479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGC TGATCATCGC CGACGACCTG TCCGGCGCCG CTGACTGCGC AATCGGCTTT
GCCGCGCACG GCGCGCGCGC GGTGGTCACA CTCGACGTGG CCGATTCCGT CGGCATCGCC
GATGCAGAAA TCGTGGCGGC TGATGTCGAT AGCCGCCGCA TGACGCCCGA AGATGCCACC
ACGAGCAACA TCGACGCCTG GCATCGCGGC GACGGCCGGC ACCGGCGGCT GTACAAGAAA
ATCGACTCGA CCCTGCGCGG TAACTGGGCC GCCGAAACGG TGGCATTGCA ACCGCTGGCG
GGGCTGGCGA TCATCGCGCC AGCGTTCCCC GCGACAGGGC GCACCACACG CGGCGGCCGT
ATGTTCGTCA ACGGCCAGCC ATTGGAAGAC ACCGACATCT GGCGCCTGGA AGGCCTGAAC
GGTCACGCTG ACATGGTGGC GCTGCTCGCC GCGCGCGGAC TGGCCACGGC GCTACTGCCG
CTCGACGTCG TTCGGGCAGG CGCGCCGGCC GTGCTCGCCG AGTTGCGTGC GCGACAGGCG
GACGGCATCG CGGCCGTTGT CTGCGACGCC GAAACCGAAC AGGATCTCGT GACCCTGGCC
GACGCCTCGA ATCAGCTCGA CACGCCGGCG TACTGGGTCG GCTCCGGCGG ACTGGCGCGC
TCGCTGTCCA CCGTGGCGCA GGTCACGCGC GCGGAGACGA CATCTCCGGT CACGTATCAC
CAGGGACCGG TGCTGACGAT GGTCGGCAGC ATGTCGGGCA TTTCCGGCAA GCAAGCCGCC
TACCTGTGCG AGCGGGCGCG AATGGAAGCC CTGGTCGTGG CGCCGCAGAC GCTACGCGAT
GGCCCGGGCC ATCCTGCATG GACCACCACG CGGCAATCGA TCACGAACTG CCTGAGCGCC
GGCCGCGACC TGCTGCTCAG CATCGGCCGC GACGATGCAT TCGACCCGGC CGAAGGGCCG
CGGCTGTCGA CCGCGCTCGC GCAACTGGCT CTGCCCTCCT TCGAACATGT TGGCGGATTG
ATCGCCACCG GCGGCGAAAC CGCGCGCGCC ATGCTCGGCG CGGCCGGTAT TGCGGCGCTG
GCATTGCGGC ACGAGGTCGA ACCCGGCGTG CCGCTGTCCG ACACCATTGA ATCCCTCCCT
GGCGCGCCGG CGCGCCGCGT GGCCACCAAG GCCGGTGCAT TCGGCACCGA AGCTGCGTTG
TGGCTGGCGT GGCAAGCCAT GCGCCAGAAC TGA
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| Protein sequence | MTWLIIADDL SGAADCAIGF AAHGARAVVT LDVADSVGIA DAEIVAADVD SRRMTPEDAT
TSNIDAWHRG DGRHRRLYKK IDSTLRGNWA AETVALQPLA GLAIIAPAFP ATGRTTRGGR
MFVNGQPLED TDIWRLEGLN GHADMVALLA ARGLATALLP LDVVRAGAPA VLAELRARQA
DGIAAVVCDA ETEQDLVTLA DASNQLDTPA YWVGSGGLAR SLSTVAQVTR AETTSPVTYH
QGPVLTMVGS MSGISGKQAA YLCERARMEA LVVAPQTLRD GPGHPAWTTT RQSITNCLSA
GRDLLLSIGR DDAFDPAEGP RLSTALAQLA LPSFEHVGGL IATGGETARA MLGAAGIAAL
ALRHEVEPGV PLSDTIESLP GAPARRVATK AGAFGTEAAL WLAWQAMRQN
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