| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2574 |
|---|
| Symbol | |
|---|
| ID | 4039399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2798748 |
|---|
| End bp | 2799365 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637977974 |
|---|
| Product | oligoribonuclease |
|---|
| Protein accession | YP_584720 |
|---|
| Protein GI | 94311510 |
|---|
| COG category | [A] RNA processing and modification |
|---|
| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCC CTTCCGCATC CTCCGTCAAA AGTGAAAACA ACCTCGTCTG GTTGGACATG
GAAATGACCG GCCTGCAGCC GGACACCGAC CGGATTATCG AAGTGGCGGT AGTGGTCACT
GACTCCGAAC TCAATATCCT GGCCGAAGGG CCCGTGCTGG TGATCCATCA GCCGGATGCC
GTGCTGGACG CGATGGACAA CTGGAACAAG GGTACCCACG GCCGCTCGGG CCTGATCGAA
AAGGTCAAGG CGTCCACGCT GACCGAAGCC CAGGCCGAGG CCGAGTTGCT GGCGTTCCTG
AAGCGCTGGG TGCCGGCCAA CAAGTCGCCG ATGTGCGGTA ATTCGATCTG CCAGGACCGC
CGCTTCATGG CGCGCTACAT GCCCAAGCTC GAGTCGTTCT TCCACTACCG CAACCTGGAC
GTCTCGACGC TCAAGGAACT CTGCAAGCGC TGGGAGCCGG CGATCCACAA GGGTTTCACC
AAGCGCCAGC TTCACACGGC CCTGGCGGAC ATCCTGGAAT CGGTGGAAGA ACTGCGCTAC
TACCGCCAGC ATTTCATCAA GACGTCGGCT TCCGCCACGC CCGAGGCGCC CGAGGCACCC
CAGGCACCAG CAGCCTGA
|
|---|
| Protein sequence | MTSPSASSVK SENNLVWLDM EMTGLQPDTD RIIEVAVVVT DSELNILAEG PVLVIHQPDA
VLDAMDNWNK GTHGRSGLIE KVKASTLTEA QAEAELLAFL KRWVPANKSP MCGNSICQDR
RFMARYMPKL ESFFHYRNLD VSTLKELCKR WEPAIHKGFT KRQLHTALAD ILESVEELRY
YRQHFIKTSA SATPEAPEAP QAPAA
|
|---|
| |