| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2564 |
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| Symbol | |
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| ID | 4039388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2787819 |
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| End bp | 2789723 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637977964 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_584710 |
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| Protein GI | 94311500 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.347829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC ACGATTTCCG TGCGGAGCAG CCTATTGCCT CCGCCACCGA CGCATTCGCC
ACGCCCGCCG ATGCCGCCAG CCCGCTCGAC AAGCTCGACG CCATGCTGAA CGCTGACGCC
GCACCGGCCG TGGAGGCCTC GGAAAACGGC TTCGCAAAAC TCGGCCTCGA CGCCGCTATC
CTGCGCGCAC TGGCCGAAGC CAACTACAAC ACACCGACAC CGGTGCAGGC GCAGGCCATC
CCCGCCTTCC TGGCCGGCCG CGACCTGCTG GTTTCCAGCC AGACCGGCTC GGGCAAGACC
GCCGCGTTCA TGCTGCCCGC AATCCAGCGC ATCAGCGAAA AGCCGGCCAC GCATCGTCCG
ACCGAACCGG CCAAGCGCAT GAAGGGCAAG CGCCCCCGTC CGTCTCCGGC CCAGCCGTCG
CTGCTGGTGC TGACGCCGAC GCGTGAACTG GCCCTGCAGG TAACCGAAGC CGCCGCCAAG
TATGGCCGCC ATCTGCGCCG TATCGTCTGC GCCAGCATCC TGGGCGGCAT GCCCTACCCG
AAGCAACTGG CCATGCTGGC CCGTATGCCG GACATCCTCG TGGCCACGCC GGGCCGCCTG
CTCGACCATA TCGAAGCCGG CCGCATTGAC CTGTCCGCGC TGGAAATGCT GGTGTTCGAC
GAAGCCGACC GTATGCTCGA CATGGGCTTC GCCGACGACA TCGACGCCAT CGTTGCCGCC
ACGCCGGCAT CGCGCCAGAC GCTGATGTTC TCGGCCACGC TCGACGCCCG CATCGCCCAA
CTGGCCTCGC GCCAGCTCCG CGACCCGCAG CGCATCGAAA TCGCCGCCGC GCGCGCCGAC
CACAGCAACA TCGAACAGCG CCTGCACTTC ACCGACGACA TGTCGCACAA GGAGCGCCTG
CTCGACCACC TGCTGCGCGA TGCATCGCTC AAGCAAGCCA TCGTCTTCAC CGCTACCAAG
CGCGATGCCG ATTCGCTGGC CGAGCGCCTG TCGGACACCG GCTTCTCCGC CGGCGCGCTG
CATGGCGACA TGACTCAGGG CGCGCGTAAC CGCACGCTGA CGGCCCTGCG CCGTGGCAAC
CTGCGCGTGC TGGTGGCCAC CGACGTGGCC GCGCGCGGCA TCGACGTGCC CGACATTACC
CACGTGGTGA ACTTCGACCT GCCCAAGCAG GCGGAAGACT ACGTGCACCG CATTGGCCGT
ACCGGCCGTG CCGGTCGCTC GGGTGTGGCG ATCAACCTCG TGAACCACGG TGACATGTTC
CAGTGGCGCC GTATCGAGCG CTTCACGAAC AACCGCATCG ACGCCTCGGT GATCGAGGGC
TTCGAACCGC GTCGCTCGCC GAAGCCGCGC TCGAACTTCG GCGGCAAGCC GGGCGGCCGC
GACGGCTTCC GCGGCAACGG TGGCACCGGT GGCGGCTATC GCGGCAACAA CGGCAGCGGT
GGCTATCGCG GTAACCGCGA AGGTAGCGGC GACCGCAACT TCGGCGAGCG CCGATTCAGC
AGCGACAACC GTGGTTTCGG CGATCGCGCC CCGCGTCCGT TCGGCGACGA CAACCGTGGT
GGCTTCGGCG ATCGTGGTGA GCGTGGTTTC GGCGACCGTA GCAATGGCAA TAGCAATGGC
GGCTACCGTG GTCAAGGTCA AGGCCAGGGT CAAGGCCAAG CTCAGCAGCG CAGCTTTGGT
GGCGAACGCA GCTTCGGCAA CCGCGACTTC GCACAGCGCG ATGGCAACCG TGACGCCACG
CAACGTGACG GTAACCGCAG CTTTGGCGGC AACCGTGACG GCCAGCGCGA CGGCAACCGT
AGCTTTGGCG ATCGCAGCTT CGGCGACCGC AAGTTCGGTG ACCGCGGTGG CGATCGCGGC
GGCTTCGGCG GCCAGCGCAA CAGCCGCTCG CGTTACGAGC GATAA
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| Protein sequence | MTQHDFRAEQ PIASATDAFA TPADAASPLD KLDAMLNADA APAVEASENG FAKLGLDAAI
LRALAEANYN TPTPVQAQAI PAFLAGRDLL VSSQTGSGKT AAFMLPAIQR ISEKPATHRP
TEPAKRMKGK RPRPSPAQPS LLVLTPTREL ALQVTEAAAK YGRHLRRIVC ASILGGMPYP
KQLAMLARMP DILVATPGRL LDHIEAGRID LSALEMLVFD EADRMLDMGF ADDIDAIVAA
TPASRQTLMF SATLDARIAQ LASRQLRDPQ RIEIAAARAD HSNIEQRLHF TDDMSHKERL
LDHLLRDASL KQAIVFTATK RDADSLAERL SDTGFSAGAL HGDMTQGARN RTLTALRRGN
LRVLVATDVA ARGIDVPDIT HVVNFDLPKQ AEDYVHRIGR TGRAGRSGVA INLVNHGDMF
QWRRIERFTN NRIDASVIEG FEPRRSPKPR SNFGGKPGGR DGFRGNGGTG GGYRGNNGSG
GYRGNREGSG DRNFGERRFS SDNRGFGDRA PRPFGDDNRG GFGDRGERGF GDRSNGNSNG
GYRGQGQGQG QGQAQQRSFG GERSFGNRDF AQRDGNRDAT QRDGNRSFGG NRDGQRDGNR
SFGDRSFGDR KFGDRGGDRG GFGGQRNSRS RYER
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