| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2556 |
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| Symbol | |
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| ID | 4039379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2780001 |
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| End bp | 2780837 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637977955 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_584702 |
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| Protein GI | 94311492 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.369957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGG TCTGCGATGT CCTTGGCGTG GCGCGCTCTG CGGTGGCAGC GAAACAGGCC
CGTTCGTCGG AATGGCGGGA TGGCCGCCGC GCCCGCCAAT ACGACGACAC GGCGCTGGTG
GCTGAAATCC ATGAGCTGGT TGCGGGCCTG CCGACATACG GCTACCGAAG GGTCTGGGCT
TTGCTACGGC GCAGTCATGA GCTGAGCGGG GCCTCGCCCG TGAACGCAAA GCGTGTTTAT
CGTGTGATGC ACGACCACCA GTTGCTGCTT CGCCGGCCTG GGCGACGACT CGATACACGT
CGCCATGACG GTCGGGTCGC TGTCGACCGT AGCAATACCC GCTGGTGTTC AGACGGCTTT
GAATTCCGTT GCGACGATGG TTCGCCGCTA CGCGTCACCT TTGCGCTCGA TTGCCATGAC
CGAGAAGCCA TTAGTTGGGC GGCGACCACC GGCGGGCACA GTGGGGATAT TGTTCGAGAT
GTCATGCTGG CGGCCGTCGA GCAGCGCTTT GGCGCCGTGC AGACCGAGCA AACCATCGAA
TGGCTCTCGG ACAACGGCTC GGCGTACATC GACCATCGTA CGCGCAGCTT CGCGCGGGAA
CTGGGCCTGG AGCCACTGAC CACGCCGGTG CGTTCTCCGC AGAGCAACGG TATGGCCGAA
TCCTTCGTCA AGACCATGAA GCGCGATTAC ATCGCGTTCA TGAACAAGCC CGACGTGCCG
ACCGCGCTCT CTCAGCTAAC GGTCGCGTTC GAGCAATACA ATGACTGGCA TCCGCATAAA
GCGTTGAAGT ATCGTTCGCC TCGGGAGTTC CGACGCGCCG CAACATCATC AACTTAA
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| Protein sequence | MKTVCDVLGV ARSAVAAKQA RSSEWRDGRR ARQYDDTALV AEIHELVAGL PTYGYRRVWA
LLRRSHELSG ASPVNAKRVY RVMHDHQLLL RRPGRRLDTR RHDGRVAVDR SNTRWCSDGF
EFRCDDGSPL RVTFALDCHD REAISWAATT GGHSGDIVRD VMLAAVEQRF GAVQTEQTIE
WLSDNGSAYI DHRTRSFARE LGLEPLTTPV RSPQSNGMAE SFVKTMKRDY IAFMNKPDVP
TALSQLTVAF EQYNDWHPHK ALKYRSPREF RRAATSST
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