| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2538 |
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| Symbol | |
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| ID | 4039361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2763333 |
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| End bp | 2764481 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637977937 |
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| Product | porin |
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| Protein accession | YP_584684 |
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| Protein GI | 94311474 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.47604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGGA AGTTCCTGAC CCTGGCGGCA TTGGCGCCTG CTGCAGTCAC TGCCCATGCG
CAGACCAGCG TGACGCTTTA CGGAGTGATT GACGGATCCG TCGAGTACGT CAACCGCGTG
GCCGCTGGCG CGGCCACGCC CACGCAGGGC GGCAGCCGCT TCGGCATGCC GAGCGTTGGC
GGCCTGTCCG CCTCGCGCTG GGGCCTGCGC GGCGTGGAAG ACCTGGGTGC CGGCAACTCG
GCGATGTTCG TGCTGGAAAG CGGCTTCCAG TGGGATTCCG GAGCCCTGCA AAGCGCCCCG
CTGTTCAACC GCCAGTCCTA CATCGGCTTG CAGAACAAGG AATACGGCAA GCTCAGCTTC
GGGCGTCAGT ACACTTCTTT CTTCGATGGC ATGGCCAACT TCGCGCCGCT GCGCTTTGCC
GCCACCTACG AACCGGGGAT CTGGTGGATG GGCCTGAACT ACCGCGAAGA CAATATGGTC
AAGTACACCG GCCAGTTCGG ACCGCTGCAG GCCGTGGGCC ACTTCTCGTT CGGTACCGGC
ACGGCAGTGC AGAACGCCAA CATCGTGTTG GCCAACGGCG GCGTGGGTGA AACACCGGGT
AATTTCACCG ACAACACCGC CTACGGCGGT TCGCTGATGT ACCTGGACAG CAGCGGCCTG
GGATTCTCAG TTGCCGCGGA CATCTGGCGC CCGGCCGCCG TAACGGGCCA ACCGGGCAGG
GTGAACAAGT ATGGCGCCGC CGCGCTCTAC AACACCGGGC CGTTCAAGTT CACGGCGGGG
TACCGCTACA ACAAGGGCGA GTTCTCCAAT GGCGCCACCG TGCTGCGTGA CGACTACTGG
TGGGCCGGCA TCAACTACCA GGCAACGCCC GCGCTGGGCC TGTCGTTGGC GTACTACTAC
GCGGACATCA AGAGCGCACG CACTGCGGCC ACGTCGCCGG AGACCAACCC GGCAAATATG
CAGCAGGTCA GCTTCATTGC CGACTACAAC TTCAGCAAGC GTACGGACGT GTACCTGTCC
GTTGGCTATG CCCACAACGG TGGGTTGAGC TTCGACAGCA CCGCCACTGC CTTTGCGTTC
AAGTACCCGA CCATGACCGG TCAGCAAAAT ATGGTCGGCG TGACGGTGGG CGTACGCCAG
GTCTTCTGA
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| Protein sequence | MKRKFLTLAA LAPAAVTAHA QTSVTLYGVI DGSVEYVNRV AAGAATPTQG GSRFGMPSVG
GLSASRWGLR GVEDLGAGNS AMFVLESGFQ WDSGALQSAP LFNRQSYIGL QNKEYGKLSF
GRQYTSFFDG MANFAPLRFA ATYEPGIWWM GLNYREDNMV KYTGQFGPLQ AVGHFSFGTG
TAVQNANIVL ANGGVGETPG NFTDNTAYGG SLMYLDSSGL GFSVAADIWR PAAVTGQPGR
VNKYGAAALY NTGPFKFTAG YRYNKGEFSN GATVLRDDYW WAGINYQATP ALGLSLAYYY
ADIKSARTAA TSPETNPANM QQVSFIADYN FSKRTDVYLS VGYAHNGGLS FDSTATAFAF
KYPTMTGQQN MVGVTVGVRQ VF
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