| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2536 |
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| Symbol | |
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| ID | 4039359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2760930 |
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| End bp | 2762051 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977935 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_584682 |
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| Protein GI | 94311472 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.12317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCTG GCATCAGGAT TGTGGAAATC TGTGGGATCG GCCCGGGCCC GTTTTGCGCA
ATGCACCTTG CGGACCTCGG CGCGGACGTG ATTGCGATAG AGCGCACGGC CTCCGGAGAG
TCCGGCGCTC CGGCAGACGG CAGCGTGCTC AATCGCGGCA AGCGTTCAGT GGTTGCCGAC
CTGAAGACGG CCGAAGGCCG GGAGCTGGTG CTGCGCCTGA TCGAAGATGC GGATGCGCTG
ATCGAAGGCA TGCGTCCGGG CGTCATGGAG CGCCTCGGGC TCGGGCCTGA CGTGCTCCAG
CAGCGCAACC CCCGCCTGGT CTACGGCCGC ATGACAGGCT GGGGCCAGTA CGGTCCACTG
GCACAAGCTG CCGGGCACGA CAACAACTAC ATTTCGCTCT CAGGCGCGCT CTACTACAAT
GGCGCCCCTT CCGAGCCGCC CTCCTCGGCC ATCACACTGG TCGGTGATGT GGGCGGCGGC
GCGCTCTACC TCGCAATTGG CCTGCTGTCC GGCATCCTGA ACGCACGCGC GACCGGCAAG
GGTACGGTGG TCGATGCGGC CATCACCGAT GGCTCGGCCC ACATGCTGCA ACTACTGCTT
GCCACGCGCA AGAAGGGCCT GGTGACGGGC GTGCGTGGCC AGAACGTTCA CGACAGCTCG
CACTTCTTCG CCACCTATCG TTGCGCCGAC GGCCACTTTG TCACGCTGGG CGCGCTTGAG
CCGCAGTTCT ATGCCTTGCT GCTGCAAAAG CTCGGCCTGG CCGAGGACCC GCGCTTCGCC
CGGCAATGGG ATCGCCAACG CTGGCCGGAA CTGCATCGCC ACTTTGCCGA GCTGTTTGCC
AGCAGGACGC GTGCGGAATG GTGCGCGCTG CTCGAGAACA CGGATGTCTG CTTCGGGCCG
GTACTGAGCC CCGAAGAAGC CGCGGCGCAT CCGCACAACG TCGCTCGCGG CGTGTACTTC
GAAAGCGACA GACAACTGCA GGCTGCGCCG GCACCGCGCT TCGACGGCCA GGCCCGGCGA
CCGGGGCCGA TACCGACGCC CGGCCAGCAT ACGGAAGAGA TCGCGGCCAT CCTTGCCGGC
AAGGATGCGC ACGGGCTATG GCATTCCCCC CGTGCAGGCT GA
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| Protein sequence | MLSGIRIVEI CGIGPGPFCA MHLADLGADV IAIERTASGE SGAPADGSVL NRGKRSVVAD
LKTAEGRELV LRLIEDADAL IEGMRPGVME RLGLGPDVLQ QRNPRLVYGR MTGWGQYGPL
AQAAGHDNNY ISLSGALYYN GAPSEPPSSA ITLVGDVGGG ALYLAIGLLS GILNARATGK
GTVVDAAITD GSAHMLQLLL ATRKKGLVTG VRGQNVHDSS HFFATYRCAD GHFVTLGALE
PQFYALLLQK LGLAEDPRFA RQWDRQRWPE LHRHFAELFA SRTRAEWCAL LENTDVCFGP
VLSPEEAAAH PHNVARGVYF ESDRQLQAAP APRFDGQARR PGPIPTPGQH TEEIAAILAG
KDAHGLWHSP RAG
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