| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2534 |
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| Symbol | |
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| ID | 4039357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2756624 |
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| End bp | 2759401 |
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| Gene Length | 2778 bp |
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| Protein Length | 925 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977933 |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_584680 |
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| Protein GI | 94311470 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.41261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.169149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCGT ACCAATCAGG GCAGACACCG TTGGCAAGCA TCCACTCGCA CGTATTCGAG
CCCATTGCCG GCACCAAGCT GGTACCGCCA CGTCCTGCAC GGCGGCCACT GGCTCGCGAG
GCGCTGCTGG CGCGGCTGCT GGAAGCGCGG CACCAGCGTT GCGTGGTGAT CCAGGGCCCA
GCCGGATGCG GCAAGACTTC GACGATGGTG AGTTGGCGCC AGGTGTTGGT ATCACTGGGC
TTCGAAGTGG CATGGCTGTC GCTGGCCGAA GAGGACGACG AGCCGGGCCG CTTTTTCGAC
TGCCTGCTCG CCAGCATCGG GCTGGTCGAG GGCGAGATTG CGCGCAAGGC CGCGAACCTC
ATCGGGGACG GCAGCGACGC ATCCAGGGTC GAGCATTGGG TGGTCACGCT GATCGAGGCA
GTTGCCAGCC AGCCACGGGA CCTGGTCCTC GTGCTCGACG ATGTGCATCA CATCCAGGAC
GCGCGCATCT GGCAGGCGCT GCAATGGCTG CTCGACTACG CCCCGCCGCA CCTGCACCTG
GTGCTGTGCT CGCGCGGCGA GTTGTCACTG TCGCTGGCGC GCTTGCACTC GCAAGGCCTC
GTCACGAAGT TTGACTTGCG CGACCTGCGT TTCAGCCCCG AGGAATCCGA AGCCTACCTG
CGTGACCAGC TTGGCGGGAT CAGCCCGCGC GACGCCCGCC GGCTGCACGA TCTGACCGAC
GGCTGGGTCG CCGGATTGCA ATTGTTCGCG CTGGATATCA AGGCGAAGCA AGGGGCTGGC
TTTTCGCCCA CTGCATTGCG CGATGCGAGT GCCTTCGCCG AGTATTTCGA GCGCGAGGTC
TTGCAGAAGC TCGCCGAGGA CGACCAGAAG CTGCTGACCT GCGTGGCGAT CTGCAGCCGC
TTTTGCGCCC CCCTGTGCGC GGCCCTGGTC GGTGAGCCGC ACGCCGTTGC GCGCATGACC
ACGCGGCTGG TCAGGCTGGA CAGCAGCAAT CTGTTCATCA TCCAGGTCAG CGGCCATGAG
CACGAAAGCT GGTATCGCCT TCATCCCCTG CTGCGCGAAG TGCTGCTTGC GCGGGTGGAG
GCAATGCCGG TCGCACAGCA GCAAGCGCTC CATGCGGCGG CATCGCGCTG GTTCGAGCAG
CGCGACCAGG TGGAAGAGGC AGTCCGGCAT GCCGTGCTCG CCGGCGAGGC GAACGCGGCC
GCCGATGCGA TCGAGGCGCG TGCTTCCGAA CTGCTGGCAC GCGGGGGCCT CGGCCAGTTG
ACCAGCCTTC TGCGCATGCT GCCGCCCGAG CAGGTCGAGT CGCGCTTCTC GCTGCAACTG
ATGCAGGCCC ACATCAACCT GCGTGCGCGC CGGCTAGATG CGGCCGCGCA GGCAATCGGG
CGCCTTGCGC AGCAGGCCGC CACGCTGGGG CTGCGCGAGC GTTACGCTGT CACGGTGCTG
CGGGGCGGCA TGGCCCTGAT GCAGGATGAC ATCGGTGCTG CGGCAGTCCT GTTGCCGGAA
CTGGAGCGTG TACCCGCGGA TGCGGACGAT TTCCTGCTGA CCGCGCGCGG CAATGTGGTG
GGCTGGCTCC ACATGCACCG AGGCGAGCAC GAGCGGGCGC GGCAAGTATT GGCCGACAGC
ACGCTGCGGG GTGGCGCGAT GGTCAGCGGT CTGGTCGGAC GCTGTCTGTC CGGGCTCAGC
CTGTTGATGG AAGGCAAGAT CCTGCAAGCC GAGCCGGTGC TCCGCCAGGT GCTGAACGAG
GCGGAGCAGC TTGGCGGCGA ATATGTGGGC GCCGCGCACA TGGCCGCAGT GCTGCTGAGC
GAGACCTTCT ACGAACTCAA TGAGATCGAT TCCGTCTGCG AATTGCTGGA GAATCGGATC
GAGCAACTGG AAGCCGTTTC GGTCCCCGAC GCGGTCCTGC GTGCCCTGCT CATGCTTGCG
CTGTCCCATC GTGTCGCCGG GCGGCGCCTG GAGGCCGCTG CCTACCTGGA CCGGCTGGAG
GATTACGCCG TGCGGCACCA CCTCGACCGT CTGCTGGCCC TGGCCCTGGC CGTGCGCTCA
CGCTGGCAGT TGCAGGAGGG CGAGATCGAC CTGGCCGAAG CAACCGTCGC CCGCGCGCAG
AAGCTGTCGA CCGAAGCGGG GGCCGGCCGC GCTTCGGTGT GGGAGATCGA CGTCGTGGCG
CAACTGTCCG CCAGCGGCCT GGCCCTGCAC CGCCATGACT ACGATGGCGC CATGGCACGC
CTGAGGCCAC TCCTGGACAG CGTGGAGCTT GCCGCGCGAG GCCGGCACTT CGCCACCGTG
CTGGTTCAGT GCGCCGTGGC CGAGGACGGG CGCGGCAATG CACGCGCTGC ACGGGAGCAC
CTCTGTGGGG CGCTGCGCCA TGGCCAGCGG TTTGGTCTGG TGCGCAGCCT TCTCGACGCA
GCGACAGGCG GACAGGGGCT GATGCGCAGG TTGCTGGACG AGCAGGGGCT CGACCCGGTC
GTGGCCTTTT ATGCCAGGCG CCTGCTGGAA GCGTCGAGCC GATGGCGCGG CCGCGCGGTG
GCGCCAGCTT CCGCCGTGCG CCGCTCCACG CCTATCAGGA CGCTCAGCGA GCGCGAGGCT
GAAGTCCTGA AGCTGATCGC GCAGGCGATG TCGAACAAGA TGGTGGCGCG CACGCTTTCC
ATTTCGCCGG AGACGGTGAA GTGGCATCTC AAGAACATCT ACATCAAGCT CGGCGTGTCC
GGTAGAGATG AAGCCGTGGC TCTGTTGCGC GATCTGGCCG CCGATACGCC AGACCTCGGC
GCCCCCAGAC CTCGCTGA
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| Protein sequence | MSSYQSGQTP LASIHSHVFE PIAGTKLVPP RPARRPLARE ALLARLLEAR HQRCVVIQGP
AGCGKTSTMV SWRQVLVSLG FEVAWLSLAE EDDEPGRFFD CLLASIGLVE GEIARKAANL
IGDGSDASRV EHWVVTLIEA VASQPRDLVL VLDDVHHIQD ARIWQALQWL LDYAPPHLHL
VLCSRGELSL SLARLHSQGL VTKFDLRDLR FSPEESEAYL RDQLGGISPR DARRLHDLTD
GWVAGLQLFA LDIKAKQGAG FSPTALRDAS AFAEYFEREV LQKLAEDDQK LLTCVAICSR
FCAPLCAALV GEPHAVARMT TRLVRLDSSN LFIIQVSGHE HESWYRLHPL LREVLLARVE
AMPVAQQQAL HAAASRWFEQ RDQVEEAVRH AVLAGEANAA ADAIEARASE LLARGGLGQL
TSLLRMLPPE QVESRFSLQL MQAHINLRAR RLDAAAQAIG RLAQQAATLG LRERYAVTVL
RGGMALMQDD IGAAAVLLPE LERVPADADD FLLTARGNVV GWLHMHRGEH ERARQVLADS
TLRGGAMVSG LVGRCLSGLS LLMEGKILQA EPVLRQVLNE AEQLGGEYVG AAHMAAVLLS
ETFYELNEID SVCELLENRI EQLEAVSVPD AVLRALLMLA LSHRVAGRRL EAAAYLDRLE
DYAVRHHLDR LLALALAVRS RWQLQEGEID LAEATVARAQ KLSTEAGAGR ASVWEIDVVA
QLSASGLALH RHDYDGAMAR LRPLLDSVEL AARGRHFATV LVQCAVAEDG RGNARAAREH
LCGALRHGQR FGLVRSLLDA ATGGQGLMRR LLDEQGLDPV VAFYARRLLE ASSRWRGRAV
APASAVRRST PIRTLSEREA EVLKLIAQAM SNKMVARTLS ISPETVKWHL KNIYIKLGVS
GRDEAVALLR DLAADTPDLG APRPR
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