| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2533 |
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| Symbol | |
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| ID | 4039356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2755689 |
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| End bp | 2756519 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977932 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_584679 |
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| Protein GI | 94311469 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.011223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.184714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGA AACTGGAAGG CAAGGTTGCC ATCGTCACTG GTGCAGGGCG TGGTATCGGC
CGCTGCATCG CCCTGAAGTT CGCCAGCGAA GGCGCCGGCG TGGTTGTCAA CGATCTTGAT
GCCGCACCGG CCAATGATGT GGTGGAGGAG ATCCGCCGCA GCGGCGGCAA GGCACTGGCC
TTTGCCTGCA ATGTCACCGA GCCGGACTTC GGCGAACGCC TGGTCAAGGC CACACTGGAG
GCGTTCGGCG GCATCGACAT CATCGTCAAC AATGCTGGCT ATACCTGGGA CAACGTCATT
CAGAAGATGA GCGACGAACA GTGGGACGCC GTCATCGACT GCCACCTGAA GGCGCCCTTC
AACCTGCTAC GGGCGGCCCA GCCCTACTTC CGCGAAGTCA GCAAGGCCGA GGCCGCCGAG
GGCCGCGAGG TCTTCCGCAA GGTGGTCAAT ATCTCGTCGA TCTCCGGTAC GCAGGGTAAC
GCCGGGCAGG TCAACTACTC CGCCGCCAAG GCGGGCGTGA TGGGCATGAC CAAGACGCTG
GCCAAGGAAT GGGGCCGGAT GAAGGTCAAC GTCAACTGCG TGGCCTTCGG CTTCATCTCC
ACCCGCCTGA CCGAGGCCAC CACCGAAGAG AAGACCGTGA GCATCGAAGG CCGCGACATC
AAGGTCGGCG TCAATCCGGA GCGCATCGCG CAGGCCAGCA AGGAGATGGC GCTCGGCCGC
CCCGGCACGG CGGAAGAAGC CGCCGGCTCG GTCTACATGT TCTGCATTCC CGAATCGAAC
TACGTGACCG GCCAGACCAT CATTTGCGGC GGCGGTCGCG GCGGATTCTG A
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| Protein sequence | MSRKLEGKVA IVTGAGRGIG RCIALKFASE GAGVVVNDLD AAPANDVVEE IRRSGGKALA
FACNVTEPDF GERLVKATLE AFGGIDIIVN NAGYTWDNVI QKMSDEQWDA VIDCHLKAPF
NLLRAAQPYF REVSKAEAAE GREVFRKVVN ISSISGTQGN AGQVNYSAAK AGVMGMTKTL
AKEWGRMKVN VNCVAFGFIS TRLTEATTEE KTVSIEGRDI KVGVNPERIA QASKEMALGR
PGTAEEAAGS VYMFCIPESN YVTGQTIICG GGRGGF
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