| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2526 |
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| Symbol | |
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| ID | 4039349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2748694 |
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| End bp | 2749563 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977925 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_584672 |
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| Protein GI | 94311462 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.413822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCCCG CATCCAGCAT CGAAAGGAAC CATGCAATGA GCAAGCTCGC AGGAAAGTCC
GCCATCGTCA CCGGCTCGGG CCGTGGCATC GGCCGTGAAG TCGCAATGAA ACTGGCGGCA
GAAGGCGCCC GTGTGGTCGT GAACGACCTG GACGCCGATC CGGCGCAAGA AGTGGTGGAG
CTGATCCGTG CAAACGGCGG CGAAGCCGTG GCCTGCGTCG GCAGCGTGAC CGCGCCTGAT
TTTGCCGACC GCCTCATCAA GACCACGGTC GACAGTTTCA AGGGCATCGA CATCATCGTC
AACAACGCCG GCTACACCTG GGACAACGTG ATCCAGAAGA TGACCGACGA GCAGTGGTAC
GCCATACTCG ACTGCCACTT GACCGCACCG TTCCGCATCC TGCGTGCCGC ACAGCCCGTC
ATCAGCGCTG CGGCCAAGGC CGAAGCCGCC GAAGGCCGCG AAGTCTTCCG CAAGGTCGTC
AACATTTCCT CGGGTGCGGC CGGTGGCAAT GCCGGGCAGT CGAACTACTC CGCCGCCAAG
GCCGGCATCC TGGGCATGAC CAAGACGCTG GCCAAGGAGT GGGGCCGCCT GAAGGTCAAC
GTCAACGCCG TGGCGTTCGG TCTGATCGAA ACGCGCCTCA CCCAGGCGCT GGCGGCGGAC
CAGAGCAAGA GCGTCAGTAT CGAAGGCCGT GAGATCAAGG TCGGCGTGCA GCAGGCAATG
CTCGACGGCG CCAGCCGCAT GATTCCGGTC GGCCGCGCGG GCAGGGCCGA AGAGGCAGCT
GGCGCTGTCT ATCTGCTTTG CACGCCGGAG TCGAACTTCC TGTCCGGCCA GGTTCTGTAC
TGTGGCGGTG GCCCTGGCGC AAACTTCTGA
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| Protein sequence | MAPASSIERN HAMSKLAGKS AIVTGSGRGI GREVAMKLAA EGARVVVNDL DADPAQEVVE
LIRANGGEAV ACVGSVTAPD FADRLIKTTV DSFKGIDIIV NNAGYTWDNV IQKMTDEQWY
AILDCHLTAP FRILRAAQPV ISAAAKAEAA EGREVFRKVV NISSGAAGGN AGQSNYSAAK
AGILGMTKTL AKEWGRLKVN VNAVAFGLIE TRLTQALAAD QSKSVSIEGR EIKVGVQQAM
LDGASRMIPV GRAGRAEEAA GAVYLLCTPE SNFLSGQVLY CGGGPGANF
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