| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2503 |
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| Symbol | |
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| ID | 4039326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2716925 |
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| End bp | 2718700 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637977902 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_584649 |
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| Protein GI | 94311439 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.809457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCA AGAAGGACAA GGTCGATTGC GTGGTGATCG GTCTCGGCTG GACTGGCGCG
ATTCTCGCCC AGGAGCTGAC CGACGCGGGG CTCGACGTCG TGGCGCTCGA ACGTGGCGCG
ATGCGCGATA CCCCGACCGA TGCCGAGTAT CCGAAAGTCG TCGACGAACT GAAGTACGTC
GTGCGCGGAG AGCTGTTTCA GGATCTCTCC CGGGAGACGG TCACGATCCG TCACGGCGTG
GATGACCTGG CGGTGCCGTA TCGGCAAAAC GGCTCGTTCC TGCTTGGCAA TGGCGTGGGT
GGCGCGGGCT TTCACTGGAA CGGGATGCAC TATCGCGTCC TGCCGGAAGA ACTGCAGTTG
CGCAGCCGCT ACGTGGATCG CTATGGCAAG AAGTTCATTC CCGAAGGGAT GCAGGTGCAG
GACTTCGGTG TCACGTACGA CGAACTCGAG CCACACTTCG ACTTCGCAGA GAAAGTGTTT
GGCACCTCGG GCACGGCCGG CAACCTGAAT GGCAAGATCC AGCCGGGCGG CAATCCGCTC
GAAGGCCACC GGTCGAGCGA GTACCCGACC CCGGCGCTGA AGAATTCGCT CGGCGCGCAA
TTGTTCGAAA AGGCCGCGCG CGAGGCGGGC TTCCACCCGT ACCCGGCACC GGCGGCGAAT
ACGTCCGAGC CCTATACGAA CCCCTACGGC GTGCGCCTTG GGCCGTGCAA TTTCTGCGGC
TTCTGCGAGG ACTTCGGCTG CTACATGTAT TCGAAGGCGT CACCGCAGAC GACGATCCTG
CCGGTCCTGC TGAAGAAACC CAACTTCGAG TTGCGCACGA AGGCGCAAGT CACCAGGATC
CTGCTCGATT CCGACAAGAA GCGCGCGACC GGCGTGCTGT ACATCGACGC CCAGGGGCGA
GAGGTCGAGC AACCCGCCGA TCTCGTGATC GTCGCGGCGT ACCAGTTGCA CAACGTGCGT
CTGCTGTTGC TCTCCGGCAT CGGCACGCCG TATGACCCGA AAACCGGCAA GGGTGTCGTT
GGCCGCAACT ACGCGTATCA GATGAACGGC GCGGTCAACG TGATGCTGCC CAAGGGCACG
CTGCTTAATC CGTTCATCGG GACGGGTGCC GGCGGGGTAG GGCTGGATGA CCTGAATGGC
GACCAGTTCG ATCATGGTCC GCTCGGCTTT CTCGGCGGGG CGAGTATTCG CCATATACGT
TATGGCGGCC GGCCCATCAA GCAGACGCCG ACTGTCCCCG GCACGCCAGC GTGGGGCAGC
AAGTGGAAGG CGGGAGTGGT CGATGCGTAC CAGCGCTATA TGACGATCGG CATTTCGGGC
TCGGTCATGC CGTATCGCGA TGCGTACCTC GATCTCGATC CGACGTACCG CGACGCCAAC
GGCCTGCCGC TGATGCGCAT GACCTTCGAC TGGCACGACA ACGAGTACGC CATGCTGGAT
TACATGGGCA CCCGCATGGA AGAGGTGGCC AAGGCGATGA AGCCCGAGGC GTACTACAAG
GCCATCCGCA AGAAGGGCCA GCACTACGAC ACGCGCGTCT ATCAGTCCAC GCACACGACA
GGCGGCGCCG TGATGGGATC GTCGCCCGAG ACCAGCGTGG TCAACAAGTA TCTGCAGAGC
TGGGATGTAC ACAACGTGTT CGTCATGGGC GCCTCGGCGT TCCCGCAGAA CATGGGCTAC
AACCCGACCG GTCTGGTAGC CGCGCTTGCC TATCACTCCG CGAAGGCTAT CCGCGAGCAG
TACTTGAAGC ACCCGGCGCC GCTGGTTCAG GCTTGA
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| Protein sequence | MAIKKDKVDC VVIGLGWTGA ILAQELTDAG LDVVALERGA MRDTPTDAEY PKVVDELKYV
VRGELFQDLS RETVTIRHGV DDLAVPYRQN GSFLLGNGVG GAGFHWNGMH YRVLPEELQL
RSRYVDRYGK KFIPEGMQVQ DFGVTYDELE PHFDFAEKVF GTSGTAGNLN GKIQPGGNPL
EGHRSSEYPT PALKNSLGAQ LFEKAAREAG FHPYPAPAAN TSEPYTNPYG VRLGPCNFCG
FCEDFGCYMY SKASPQTTIL PVLLKKPNFE LRTKAQVTRI LLDSDKKRAT GVLYIDAQGR
EVEQPADLVI VAAYQLHNVR LLLLSGIGTP YDPKTGKGVV GRNYAYQMNG AVNVMLPKGT
LLNPFIGTGA GGVGLDDLNG DQFDHGPLGF LGGASIRHIR YGGRPIKQTP TVPGTPAWGS
KWKAGVVDAY QRYMTIGISG SVMPYRDAYL DLDPTYRDAN GLPLMRMTFD WHDNEYAMLD
YMGTRMEEVA KAMKPEAYYK AIRKKGQHYD TRVYQSTHTT GGAVMGSSPE TSVVNKYLQS
WDVHNVFVMG ASAFPQNMGY NPTGLVAALA YHSAKAIREQ YLKHPAPLVQ A
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