Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2483 |
Symbol | sdhB |
ID | 4039306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2696816 |
End bp | 2697517 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637977882 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_584629 |
Protein GI | 94311419 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.571156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0308742 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTA TTTTCGAAGT CTACCGCTAC GATCCGGACA AGGACGCCGC GCCCCGCATG CAGACCTACG AGGTGGAACT CGACGGTCAC GAGCGCATGC TGCTGGATGC GCTGGTCAAG CTGAAGAAGC TCGATGAGAC GATCTCGTTC CGTCGCTCGT GCCGTGAAGG CGTGTGCGGC TCGGACGCGA TGAACATCAA CGGCAAGAAC GGCCTGGCCT GCCTGACGAA CATGCGCGAA CTGCCGGACC GCATCGTGCT GCGTCCGCTG CCCGGCCTGC CCGTGGTGCG CGACCTGATC GTCGACATGA CGAACTTCTT CAAGCAGTAC AACTCGATCA AGCCGTTCCT GATCAACGAC GAGCCGCCGC CCGAGAAGGA GCGTCTGCAA TCGCCGCAGG AACGTGACGA GCTGGACGGC CTGTACGAGT GCATCTTGTG CGCAAGCTGC TCGACGTCGT GCCCGTCGTT CTGGTGGAAC CCGGACAAGT TCGTTGGCCC GGCCGGTCTG CTGCAGGCCT ACCGCTTTAT CGCGGACAGC CGTGACCAGG CCACCAGCGA GCGTCTGGAC AACCTGAACG ACCCGTACCG TCTGTTCCGT TGCCATAGCA TCATGAACTG CGTCGATGTG TGCCCGAAGG GCCTCAACCC GACGAAGGCG ATTGGCAAGA TCAAGGAATT GATGGTTCGC CGCGCTGTTT AA
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Protein sequence | MKRIFEVYRY DPDKDAAPRM QTYEVELDGH ERMLLDALVK LKKLDETISF RRSCREGVCG SDAMNINGKN GLACLTNMRE LPDRIVLRPL PGLPVVRDLI VDMTNFFKQY NSIKPFLIND EPPPEKERLQ SPQERDELDG LYECILCASC STSCPSFWWN PDKFVGPAGL LQAYRFIADS RDQATSERLD NLNDPYRLFR CHSIMNCVDV CPKGLNPTKA IGKIKELMVR RAV
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