Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2479 |
Symbol | |
ID | 4039302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2692196 |
End bp | 2693122 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637977878 |
Product | inner-membrane translocator |
Protein accession | YP_584625 |
Protein GI | 94311415 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.403634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0243743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAT TTCTTCCACA GTTCACTCAG CAGCTGGTCA ACGGCCTGAC GCTGGGTGCG ATCTATGCGT TGATCGCCAT CGGCTACACG ATGGTCTACG GCATCATCGG CATGATCAAC TTTGCCCACG GCGAGATCTA CATGATCGGC GCGTACGTGG GTCTCGTGAC GCTGACCGCC ATTGGCGCGC AGGCGGGTTA TCCGCTGCCG CTGGTGCTTG GTGCGGCACT GATCGTCTCC GTCGCCGTGA CAGGCTGCTA CGGCTATGCC GTCGAGCGCG TGGCGTATCG CCCCCTGCGT GGCGGGCCGC GCCTGGTGCC GTTGATCTCG GCGATCGGCA TGTCCATCTT CCTGCAGAAC TATGTCCAGA TCGGGCAGGG CGCGCGCGAC GTATCGGTGC CCATCCTGAT TTCTGGCGCG ATCGAATTCC AGATGGGCGG AGACTTCACG GTGACCGTGC CGTATTCGCG GCTGCTCATC GTGGGCGTGA CGCTAGTGCT GATGATCGTG CTGACGCTGT TCATCGGCCA CTCCCGCATG GGCCGCGCCT GCCGCGCCTG CGCGGAAGAC ATGCGCATGG CTAACCTGCT CGGCATCGAC ACGAACCGCG TGATCTCGTT CACGTTCGTG CTCGGCGCGA TGCTGGCCGC CGTGGGTGGC GTGCTGATTG GTCTGACGAT CGGCAAGCTT AATCCGTTCA TCGGCTTCAT CGCTGGCATC AAGGCCTTCA CGGCGGCGGT GCTTGGCGGC ATCGGCAGCA TCCCGGGCGC CATGCTCGGC GGCGTGCTGC TGGGTCTGGC CGAAACCTTC GCTTCCGGCT ACATGCCGGC CGAGTACAAG GACGTGGTGG CGTTCGGCCT GCTGGTCCTG GTGCTGCTCT TCCGTCCCAC GGGCCTGCTC GGCAAGCCCG ACGTGGAAAA GGTCTAA
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Protein sequence | MNEFLPQFTQ QLVNGLTLGA IYALIAIGYT MVYGIIGMIN FAHGEIYMIG AYVGLVTLTA IGAQAGYPLP LVLGAALIVS VAVTGCYGYA VERVAYRPLR GGPRLVPLIS AIGMSIFLQN YVQIGQGARD VSVPILISGA IEFQMGGDFT VTVPYSRLLI VGVTLVLMIV LTLFIGHSRM GRACRACAED MRMANLLGID TNRVISFTFV LGAMLAAVGG VLIGLTIGKL NPFIGFIAGI KAFTAAVLGG IGSIPGAMLG GVLLGLAETF ASGYMPAEYK DVVAFGLLVL VLLFRPTGLL GKPDVEKV
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