Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2476 |
Symbol | |
ID | 4039299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2689444 |
End bp | 2690145 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637977875 |
Product | ABC transporter-related protein |
Protein accession | YP_584622 |
Protein GI | 94311412 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.865811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.164056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGC TGGAAAACGT CCATACCCAC TACGGCGCGG TCGAGGCGCT GTCGGGTGTG TCGATCGAGG TCAACAAGGG CGAGATCGTC ACGCTGATCG GTAGCAACGG GGCCGGCAAG ACCACGCTGA TGATGACGGT GTGCGGCACG CCGCGCGCGT CCAGCGGCCG GGTGTCGTTC GAGGGCCAGG ACATCACGCG GCGCAACACG CACGAGATCA TGCGCATGGG CATGGCCATC TCGCCGGAAG GCCGCCGTGT CTTCCCGAGC CTGACTGTGC TGGAGAACCT CAAGATGGGG GCGTTCTTCG CCAGCCGTCA CGAGATCGAG GAAGGCATCG AGCACGTGTT CAAGCTGTTC CCGCGTCTGA ATCAGCGCGC TAGCCAGCGC GCTGGCACGA TGTCGGGCGG CGAACAGCAG ATGCTGGCGA TCGGCCGCGC GCTGATGAGC AAGCCGCGCC TGCTGTTGCT GGACGAGCCG ACGCTTGGCC TGGCCCCGCT GATCATCGCG CAGATCTTCG ACATTATTCG CACGATTCGT GACGAGGGCG TCACCGTGTT CCTGGTCGAG CAGAACGCCA ACAAGGCGCT GCAGGCGGCC GACCGGGGCT ATGTGCTGGA AACCGGCAAG GTGGTGCTGG CCGATACCGG ACAGAACCTG CTGGCCAACG ACCGCATCCG CGCGGCGTAT CTGGGCGGGT AA
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Protein sequence | MLKLENVHTH YGAVEALSGV SIEVNKGEIV TLIGSNGAGK TTLMMTVCGT PRASSGRVSF EGQDITRRNT HEIMRMGMAI SPEGRRVFPS LTVLENLKMG AFFASRHEIE EGIEHVFKLF PRLNQRASQR AGTMSGGEQQ MLAIGRALMS KPRLLLLDEP TLGLAPLIIA QIFDIIRTIR DEGVTVFLVE QNANKALQAA DRGYVLETGK VVLADTGQNL LANDRIRAAY LGG
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