Gene Rmet_2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2476 
Symbol 
ID4039299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2689444 
End bp2690145 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content65% 
IMG OID637977875 
ProductABC transporter-related protein 
Protein accessionYP_584622 
Protein GI94311412 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.865811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.164056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC TGGAAAACGT CCATACCCAC TACGGCGCGG TCGAGGCGCT GTCGGGTGTG 
TCGATCGAGG TCAACAAGGG CGAGATCGTC ACGCTGATCG GTAGCAACGG GGCCGGCAAG
ACCACGCTGA TGATGACGGT GTGCGGCACG CCGCGCGCGT CCAGCGGCCG GGTGTCGTTC
GAGGGCCAGG ACATCACGCG GCGCAACACG CACGAGATCA TGCGCATGGG CATGGCCATC
TCGCCGGAAG GCCGCCGTGT CTTCCCGAGC CTGACTGTGC TGGAGAACCT CAAGATGGGG
GCGTTCTTCG CCAGCCGTCA CGAGATCGAG GAAGGCATCG AGCACGTGTT CAAGCTGTTC
CCGCGTCTGA ATCAGCGCGC TAGCCAGCGC GCTGGCACGA TGTCGGGCGG CGAACAGCAG
ATGCTGGCGA TCGGCCGCGC GCTGATGAGC AAGCCGCGCC TGCTGTTGCT GGACGAGCCG
ACGCTTGGCC TGGCCCCGCT GATCATCGCG CAGATCTTCG ACATTATTCG CACGATTCGT
GACGAGGGCG TCACCGTGTT CCTGGTCGAG CAGAACGCCA ACAAGGCGCT GCAGGCGGCC
GACCGGGGCT ATGTGCTGGA AACCGGCAAG GTGGTGCTGG CCGATACCGG ACAGAACCTG
CTGGCCAACG ACCGCATCCG CGCGGCGTAT CTGGGCGGGT AA
 
Protein sequence
MLKLENVHTH YGAVEALSGV SIEVNKGEIV TLIGSNGAGK TTLMMTVCGT PRASSGRVSF 
EGQDITRRNT HEIMRMGMAI SPEGRRVFPS LTVLENLKMG AFFASRHEIE EGIEHVFKLF
PRLNQRASQR AGTMSGGEQQ MLAIGRALMS KPRLLLLDEP TLGLAPLIIA QIFDIIRTIR
DEGVTVFLVE QNANKALQAA DRGYVLETGK VVLADTGQNL LANDRIRAAY LGG